Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:4940000:4962492 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4962492, End: 4963274, Length: 783

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:487843448784344879060627Pseudomonas syringae pv. syringae B728a, complete genomeGlutathione S-transferase, N-terminal1e-99362
NC_016589:2875000:290897629089762909596621Burkholderia sp. YI23 chromosome 1, complete sequenceglutathione S-transferase1e-39163
NC_004463:5722468:572292457229245723592669Bradyrhizobium japonicum USDA 110, complete genomeglutathione S-transferase2e-39162
NC_004129:5723787:575119157511915751814624Pseudomonas fluorescens Pf-5, complete genomeglutathione S-transferase domain protein3e-39162
NC_007951:4608560:463290546329054633558654Burkholderia xenovorans LB400 chromosome 1, complete sequenceGlutathione S-transferase5e-38157
NC_012997:59407:781017810178772672Teredinibacter turnerae T7901, complete genomeglutathione S-transferase family protein5e-34144
NC_014640:6815264:684700768470076847669663Achromobacter xylosoxidans A8 chromosome, complete genomeglutathione S-transferase2e-33142
NC_008781:2883968:289913728991372899793657Polaromonas naphthalenivorans CJ2, complete genomeglutathione S-transferase-like protein6e-33140
NC_012988:4633930:463393046339304634586657Methylobacterium extorquens DM4, complete genomeglutathione S-transferase4e-30131
NC_010172:4185904:418722041872204187876657Methylobacterium extorquens PA1, complete genomeputative glutathione-S-transferase protein4e-30131
NC_012808:4235567:423556742355674236223657Methylobacterium extorquens AM1, complete genomeputative glutathione S-transferase4e-30131
NC_011001:854713:856869856869857588720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceglutathione-S-tranferase family protein7e-25114
NC_008543:582129:584287584287585006720Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceGlutathione S-transferase, N-terminal domain1e-24113
NC_006677:1503513:150351315035131504160648Gluconobacter oxydans 621H, complete genomeGlutathione S-transferase1e-21103