Pre_GI: BLASTP Hits

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Query: NC_004578:4940000:4960979 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4960979, End: 4961557, Length: 579

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:487664148766414877219579Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF801e-86318
NC_010524:1005355:100569410056941006269576Leptothrix cholodnii SP-6, complete genomeATP--cobalamin adenosyltransferase5e-24110
NC_008343:88184:104341104341104913573Granulibacter bethesdensis CGDNIH1, complete genomecobalamin adenosyltransferase family protein2e-23108
NC_016510:2856000:286604928660492866618570Flavobacterium columnare ATCC 49512 chromosome, complete genomehypothetical protein2e-22105
NC_015496:2279829:229059122905912291166576Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeATP/cobalamin adenosyltransferase4e-2097.4
NC_020156:49666:560775607756649573Nonlabens dokdonensis DSW-6, complete genomecobalamin adenosyltransferase2e-1995.5
NC_009937:53082:722277222772811585Azorhizobium caulinodans ORS 571, complete genomecobalamin adenosyltransferase6e-1994
NC_004193:950000:954682954682955245564Oceanobacillus iheyensis HTE831, complete genomehypothetical protein9e-1993.2
NC_010382:1020516:102205910220591022550492Lysinibacillus sphaericus C3-41, complete genomehypothetical protein2e-1892
NC_013730:1342500:134251813425181343096579Spirosoma linguale DSM 74, complete genomeATP/cobalamin adenosyltransferase2e-1892
NC_019673:8114376:812299581229958123567573Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1890.5
NC_020054:6259733:627729462772946277860567Fibrella aestuarina BUZ 2 drat genomeATP/cobalamin adenosyltransferase2e-1789
NC_013093:7174636:718557571855757186147573Actinosynnema mirum DSM 43827, complete genomeATP/cobalamin adenosyltransferase3e-1788.2
NC_018704:645843:654533654533655093561Amphibacillus xylanus NBRC 15112, complete genomecob(I)alamin adenosyltransferase5e-1787.4
NC_009922:868262:870253870253870834582Alkaliphilus oremlandii OhILAs, complete genomeATP--cobalamin adenosyltransferase1e-1686.3
NC_010729:1344903:136228613622861362849564Porphyromonas gingivalis ATCC 33277, complete genomeprobable ATP:corrinoid adenosyltransferase1e-1686.3
NC_014376:1586649:159213015921301592708579Clostridium saccharolyticum WM1 chromosome, complete genomeATP/cobalamin adenosyltransferase2e-1685.5
NC_016109:5543112:555837355583735558945573Kitasatospora setae KM-6054, complete genomeputative cobalamin adenosyltransferase3e-1581.3
NC_010674:2185704:219596121959612196473513Clostridium botulinum B str. Eklund 17B, complete genomeATP:cob(I)alamin adenosyltransferase5e-1580.9
NC_013922:331847:382674382674383207534Natrialba magadii ATCC 43099 chromosome, complete genomeATP/cobalamin adenosyltransferase7e-1580.5
NC_002689:78297:102084102084102626543Thermoplasma volcanium GSS1, complete genomehypothetical protein7e-1580.5
NC_010723:2082750:209082620908262091338513Clostridium botulinum E3 str. Alaska E43, complete genomeATP:cob(I)alamin adenosyltransferase3e-1478.2
NC_003366:1122654:113269811326981133210513Clostridium perfringens str. 13, complete genomehypothetical protein4e-1477.8
NC_015435:570980:577330577330577854525Metallosphaera cuprina Ar-4 chromosome, complete genomeATP:cob(I)alamin adenosyltransferase6e-1477.4
NC_018750:5399316:541655454165545417126573Streptomyces venezuelae ATCC 10712, complete genomeCob(I)alamin adenosyltransferase PduO8e-1476.6
NC_015732:191554:211934211934212458525Spirochaeta caldaria DSM 7334 chromosome, complete genomeATP/cobalamin adenosyltransferase2e-1375.5
NC_008261:1332864:134356213435621344074513Clostridium perfringens ATCC 13124, complete genomeputative ATP:cob(I)alamin adenosyltransferase3e-1374.7
NC_010729:1385217:140788214078821408448567Porphyromonas gingivalis ATCC 33277, complete genomeprobable cobalamin adenosyltransferase5e-1374.3
NC_012588:1585808:160529816052981605816519Sulfolobus islandicus M.14.25 chromosome, complete genomeATP--cobalamin adenosyltransferase4e-1374.3
NC_012622:1646000:166330316633031663821519Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeATP/cobalamin adenosyltransferase4e-1374.3
NC_012726:1611936:163142816314281631946519Sulfolobus islandicus M.16.4 chromosome, complete genomeATP--cobalamin adenosyltransferase4e-1374.3
NC_013769:1705500:172446117244611724979519Sulfolobus islandicus L.D.8.5 chromosome, complete genomeATP--cobalamin adenosyltransferase4e-1374.3
NC_017275:1635959:165550916555091656027519Sulfolobus islandicus HVE10/4 chromosome, complete genomeATP-cobalamin adenosyltransferase4e-1374.3
NC_017276:1491473:151102415110241511542519Sulfolobus islandicus REY15A chromosome, complete genomeATP-cobalamin adenosyltransferase4e-1374.3
NC_008262:1139500:115017411501741150686513Clostridium perfringens SM101, complete genomeATP:cob(I)alamin adenosyltransferase, putative5e-1373.9
NC_012623:960327:962799962799963317519Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeATP/cobalamin adenosyltransferase7e-1373.6
NC_014633:442755:4598114598114608661056Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceATP/cobalamin adenosyltransferase7e-1373.6
NC_002754:319315:320846320846321364519Sulfolobus solfataricus P2, complete genomehypothetical protein4e-1270.9
NC_000961:597385:598068598068598586519Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-1270.9
NC_013766:1202713:121483912148391215834996Listeria monocytogenes 08-5578 chromosome, complete genomeATP:cob(I)alamin adenosyltransferase protein PduO1e-1169.3
NC_003106:1457802:145903314590331459566534Sulfolobus tokodaii str. 7, complete genomehypothetical protein2e-1168.9
NC_002754:513790:515500515500516024525Sulfolobus solfataricus P2, complete genomehypothetical protein2e-1168.6
NC_012622:1395601:141439314143931414917525Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeATP/cobalamin adenosyltransferase7e-1167
NC_012623:1141951:114317511431751143699525Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeATP/cobalamin adenosyltransferase7e-1167
NC_012632:1543735:156146515614651561989525Sulfolobus islandicus M.16.27 chromosome, complete genomeATP--cobalamin adenosyltransferase1e-1066.6
NC_012588:1419318:143704814370481437572525Sulfolobus islandicus M.14.25 chromosome, complete genomeATP--cobalamin adenosyltransferase1e-1066.6
NC_012488:1159463:117288711728871173882996Listeria monocytogenes Clip81459, complete genomePduO protein1e-1066.2
NC_006347:2861498:287576528757652876340576Bacteroides fragilis YCH46, complete genomeputative ATP:cob(I)alamin adenosyltransferase2e-1065.5
NC_003228:2929006:294937829493782949953576Bacteroides fragilis NCTC 9343, complete genomeputative cobalamin adenosyltransferase2e-1065.5
NC_016776:2913966:293435829343582934933576Bacteroides fragilis 638R, complete genomeputative cobalamin adenosyltransferase2e-1065.5
NC_011026:2624775:264498726449872645562576Chloroherpeton thalassium ATCC 35110, complete genomeATP/cobalamin adenosyltransferase2e-0858.5
NC_019970:2080419:208445520844552085420966Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeATP:cob(I)alamin adenosyltransferase4e-0754.7
NC_014654:1113116:112692611269261127492567Halanaerobium sp. 'sapolanicus' chromosome, complete genomeATP/cobalamin adenosyltransferase6e-0753.9
NC_010320:1949852:1953972195397219549731002Thermoanaerobacter sp. X514 chromosome, complete genomeATP--cobalamin adenosyltransferase9e-0753.5
NC_014538:985339:99937199937110003721002Thermoanaerobacter sp. X513 chromosome, complete genomeATP/cobalamin adenosyltransferase9e-0753.5
NC_013525:556036:567707567707568231525Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeATP/cobalamin adenosyltransferase3e-0651.6