Pre_GI: BLASTP Hits

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Query: NC_004578:4940000:4943287 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4943287, End: 4943733, Length: 447

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:486051948605194860875357Pseudomonas syringae pv. syringae B728a, complete genomeMethylated-DNA-[protein]-cysteine S-methyltransferase3e-53206
NC_016803:593484:612204612204612533330Desulfovibrio desulfuricans ND132 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein5e-1373.2
NC_006347:3805500:380944938094493809793345Bacteroides fragilis YCH46, complete genomeputative methylated-DNA methyltransferase9e-1372.4
NC_012880:1127997:115034111503411150658318Dickeya dadantii Ech703, complete genomemethylated-DNA/protein-cysteine methyltransferase3e-1270.9
NC_015566:1127595:113483111348311135145315Serratia sp. AS12 chromosome, complete genomemethylated-DNA/protein-cysteine methyltransferase3e-1270.9
NC_015567:1127780:113501611350161135330315Serratia sp. AS9 chromosome, complete genomemethylated-DNA/protein-cysteine methyltransferase3e-1270.9
NC_016631:1329702:132933113293311329711381Granulicella mallensis MP5ACTX8 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein1e-1065.5
NC_020291:2291418:229366722936672293975309Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeO-6-methylguanine DNA methyltransferase1e-1065.5
NC_018868:3943088:396898939689893969297309Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein1e-1065.1
NC_008820:1818695:182203018220301822431402Prochlorococcus marinus str. MIT 9303, complete genomeMethylated-DNA--protein- cysteinemethyltransferase1e-1065.1
NC_005071:288922:308441308441308842402Prochlorococcus marinus str. MIT 9313, complete genomeMethylated-DNA--protein-cysteine methyltransferase2e-1064.7
NC_017188:1172181:131529613152961315604309Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein2e-1064.3
NC_017190:2130651:213699521369952137303309Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein2e-1064.3
NC_017191:1173989:131687313168731317181309Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein2e-1064.3
NC_009482:485238:508110508110508460351Synechococcus sp. RCC307 chromosome, complete genomemethylated-DNA--protein-cysteine methyltransferase1e-0962
NC_007513:1503955:152510115251011525457357Synechococcus sp. CC9902, complete genomeMethylated-DNA-(protein)-cysteine S-methyltransferase1e-0961.6
NC_013173:1305916:131615513161551316526372Desulfomicrobium baculatum DSM 4028, complete genomeMethylated-DNA-(protein)-cysteine S- methyltransferase DNA binding2e-0960.8
NC_014622:2477019:249761024976102497933324Paenibacillus polymyxa SC2 chromosome, complete genomemethylated-DNA-(protein)-cysteine s-methyltransferase DNA binding protein3e-0960.8
NC_015966:2875140:287709628770962877509414Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemethylated-DNA/protein-cysteine methyltransferase1e-0858.5
NC_014376:2921769:292273029227302923029300Clostridium saccharolyticum WM1 chromosome, complete genomeMethylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein2e-0857.8
NC_008319:635157:652076652076652453378Synechococcus sp. CC9311, complete genomeputative methylated-DNA-[protein]-cysteine S-methyltransferase6e-0856.2
NC_014032:2767966:278693627869362787322387Salinibacter ruber M8 chromosome, complete genomehypothetical protein2e-0755.1
NC_014032:2767966:277822227782222778554333Salinibacter ruber M8 chromosome, complete genomemethylated-DNA--protein-cysteine methyltransferase2e-0754.7
NC_007677:2687000:270011227001122700444333Salinibacter ruber DSM 13855, complete genome6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily2e-0754.7
NC_018665:650847:664891664891665379489Exiguobacterium antarcticum B7 chromosome, complete genomeMethylated-DNA--protein-cysteine methyltransferase4e-0650.4
NC_019904:2327842:234563323456332345971339Echinicola vietnamensis DSM 17526 chromosome, complete genomemethylated DNA-protein cysteine methyltransferase5e-0650.1
NC_010556:691498:706554706554707039486Exiguobacterium sibiricum 255-15, complete genomemethylated-DNA--protein-cysteine methyltransferase5e-0650.1