Pre_GI: BLASTP Hits

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Query: NC_004578:4432983:4455286 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4455286, End: 4455753, Length: 468

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:4379920:439025743902574390814558Pseudomonas putida W619, complete genomehypothetical protein3e-31134
NC_009656:4527457:457748045774804578112633Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1168.9
NC_008463:5246954:525520652552065255913708Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-1063.5
NC_014828:2605798:262458426245842625183600Ethanoligenens harbinense YUAN-3 chromosome, complete genomephage protein3e-0960.8
NC_004722:1804788:182727918272791827866588Bacillus cereus ATCC 14579, complete genomePhage protein3e-0754.3
NC_002967:1166965:119035211903521190948597Treponema denticola ATCC 35405, complete genomehypothetical protein4e-0753.9
NC_007929:785875:797586797586798197612Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein4e-0753.5
NC_010002:5143869:515265251526525153491840Delftia acidovorans SPH-1, complete genomehypothetical protein2e-0651.2