Pre_GI: BLASTP Hits

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Query: NC_004578:3241618:3260162 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3260162, End: 3261304, Length: 1143

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007947:1229807:1243873124387312450661194Methylobacillus flagellatus KT, complete genomehypothetical protein4e-120431
NC_015064:1021483:1030628103062810317611134Acidobacterium sp. MP5ACTX9 chromosome, complete genomehypothetical protein9e-88323
NC_008536:435221:4477064477064488631158Solibacter usitatus Ellin6076, complete genomehypothetical protein9e-73274
NC_014562:469154:4892794892794930403762Pantoea vagans C9-1 chromosome, complete genomePutative teichuronic acid biosynthesis glycosyltransferase tuaH2e-51203
NC_008618:200017:2106522106522119231272Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein3e-0756.6