Pre_GI: BLASTP Hits

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Query: NC_004578:3241618:3257076 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3257076, End: 3258095, Length: 1020

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3253575:3258679325867932596981020Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein9e-130463
NC_012721:770651:8268278268278278311005Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein7e-35147
NC_020063:2230000:225721222572122258204993Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-33143
NC_020301:1342924:1344837134483713459251089Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein8e-1271.6
NC_005966:923008:944855944855945619765Acinetobacter sp. ADP1, complete genomehypothetical protein1e-1171.2
NC_005955:1166521:1170990117099011720751086Bartonella quintana str. Toulouse, complete genomehypothetical protein3e-1066.2
NC_005955:1284500:1289704128970412907891086Bartonella quintana str. Toulouse, complete genomehypothetical protein3e-1066.2
NC_010505:5967324:598295559829555983878924Methylobacterium radiotolerans JCM 2831, complete genomeconserved hypothetical membrane spanning protein9e-1064.7
NC_012808:4137000:415269641526964153658963Methylobacterium extorquens AM1, complete genomehypothetical protein4e-0859.3