Pre_GI: BLASTP Hits

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Query: NC_004578:3241618:3253364 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3253364, End: 3254194, Length: 831

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3253575:325766132576613258416756Pseudomonas syringae pv. phaseolicola 1448A, complete genomePAP2 superfamily protein3e-133474
NC_007492:857428:858096858096858917822Pseudomonas fluorescens PfO-1, complete genomePAP2 superfamily protein6e-98357
NC_007005:3684099:370742537074253708297873Pseudomonas syringae pv. syringae B728a, complete genomePAP2 superfamily protein3e-86318
NC_020064:1611820:161789916178991618645747Serratia marcescens FGI94, complete genomePAP2 (acid phosphatase) superfamily protein2e-1789.7
NC_013446:2820000:284438628443862845120735Comamonas testosteroni CNB-2, complete genomephosphoesterase, PA-phosphatase related protein4e-1272
NC_009436:1466580:146719614671961467924729Enterobacter sp. 638, complete genomePA-phosphatase-like phosphoesterase7e-1271.2
NC_007575:319119:325577325577326257681Sulfurimonas denitrificans DSM 1251, complete genomePAP2 superfamily protein6e-1168.2
NC_010002:1879220:191786919178691918630762Delftia acidovorans SPH-1, complete genomehypothetical protein4e-1065.5
NC_010995:1101614:110271211027121103515804Cellvibrio japonicus Ueda107, complete genometransmembrane protein9e-1064.3