Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:2185907:2189494 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2189494, End: 2191350, Length: 1857

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3851433:3862553386255338641451593Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-127456
NC_007005:4062311:4073399407339940760322634Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-101370
NC_005773:3851433:3860621386062138625011881Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-46186
NC_004578:2185907:2192645219264521942641620Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-38160
NC_007005:4062311:4071519407151940733481830Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-27123
NC_004578:2185907:219939821993982200060663Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1480.9
NC_020064:3998715:4040288404028840418531566Serratia marcescens FGI94, complete genomehypothetical protein6e-0963.2
NC_016830:5109953:5129495512949551309431449Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein5e-0963.2
NC_020064:3998715:4075824407582440773741551Serratia marcescens FGI94, complete genomehypothetical protein8e-0859.3
NC_017986:1042642:1047086104708610484261341Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-0757
NC_015733:1680500:1691554169155416930261473Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-0655.5
NC_009512:4287605:4289039428903942904961458Pseudomonas putida F1, complete genomehypothetical protein2e-0654.7