Pre_GI: BLASTP Hits

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Query: NC_004578:212468:224484 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 224484, End: 225383, Length: 900

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014960:1380500:140240914024091403359951Anaerolinea thermophila UNI-1, complete genomelysine biosynthesis protein LysX1e-0860.5
NC_002754:105256:132570132570133430861Sulfolobus solfataricus P2, complete genomeRibosomal protein S6 modification protein (rimK-1)6e-0858.5
NC_015435:1713051:173369417336941734554861Metallosphaera cuprina Ar-4 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase7e-0858.2
NC_012588:1788084:181548318154831816334852Sulfolobus islandicus M.14.25 chromosome, complete genomelysine biosynthesis protein LysX1e-0757.8
NC_012623:733638:739081739081739932852Sulfolobus islandicus Y.N.15.51 chromosome, complete genomelysine biosynthesis protein LysX1e-0757.8
NC_012589:1917421:194756419475641948415852Sulfolobus islandicus L.S.2.15, complete genomelysine biosynthesis enzyme LysX9e-0857.8
NC_012622:1859149:188578318857831886634852Sulfolobus islandicus Y.G.57.14 chromosome, complete genomelysine biosynthesis protein LysX9e-0857.8
NC_012726:1792344:181974318197431820594852Sulfolobus islandicus M.16.4 chromosome, complete genomelysine biosynthesis protein LysX9e-0857.8
NC_013769:1908164:193479919347991935650852Sulfolobus islandicus L.D.8.5 chromosome, complete genomelysine biosynthesis protein LysX9e-0857.8
NC_010085:1174917:117940811794081180265858Nitrosopumilus maritimus SCM1, complete genomelysine biosynthesis enzyme LysX1e-0757.4
NC_015518:761380:810079810079810930852Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX1e-0757.4
NC_015562:627000:643084643084643905822Methanotorris igneus Kol 5 chromosome, complete genomealpha-L-glutamate ligase, RimK family9e-0754.3
NC_015518:997707:100165710016571002457801Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX8e-0651.2