Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:1153738:1162781 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 1162781, End: 1163902, Length: 1122

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012856:1585989:1599571159957116006711101Ralstonia pickettii 12D chromosome 1, complete genomeheat shock protein DnaJ domain protein7e-48191
NC_011001:163813:1638131638131649401128Burkholderia cenocepacia J2315 chromosome 2, complete sequenceDnaJ domain-containing protein7e-39161
NC_007511:3371319:3390189339018933913041116Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein3e-36152
NC_013722:2919560:2943057294305729442111155Xanthomonas albilineans, complete genomehypothetical protein2e-31137
NC_011761:1499500:1515103151510315162811179Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein1e-27124
NC_005126:2262500:2278708227870822797361029Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0757.8