Pre_GI: BLASTP Hits

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Query: NC_004547:843475:851060 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 851060, End: 851452, Length: 393

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:3642679:367641036764103676805396Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-58221
NC_015572:1:392173921739615399Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-38157
NC_019896:17873:390973909739486390Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein6e-34142
NC_000964:4164683:417678041767804177169390Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein8e-34142