Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:667988:690918 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 690918, End: 692651, Length: 1734

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:569856:5857255857255874761752Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecytochrome c biogenesis protein transmembrane region01075
NC_017154:331921:3511873511873529741788Yersinia pestis D106004 chromosome, complete genomethiol:disulfide interchange protein0716
NC_006155:456000:4763734763734781601788Yersinia pseudotuberculosis IP 32953, complete genomethiol:disulfide interchange protein precursor0714
NC_004431:4955658:4972379497237949740761698Escherichia coli CFT073, complete genomethiol:disulfide interchange protein precursor0713
NC_005810:515744:5358245358245376111788Yersinia pestis biovar Microtus str. 91001, complete genomethiol:disulfide interchange protein precursor0713
NC_011745:4862218:4881993488199348836901698Escherichia coli ED1a chromosome, complete genomethiol:disulfide interchange protein0712
AP010958:5090696:5120677512067751223741698Escherichia coli O103:H2 str. 12009 DNA, complete genomefused thiol: disulfide interchange protein: activator of DsbC/conserved protein0711
CU928145:4792703:4808917480891748106141698Escherichia coli 55989 chromosome, complete genomefused thiol:disulfide interchange protein: activator of DsbC ; conserved hypothetical protein0711
NC_011748:4792703:4808917480891748106141698Escherichia coli 55989, complete genomethiol:disulfide interchange protein precursor0711
NC_013353:5090696:5120677512067751223741698Escherichia coli O103:H2 str. 12009, complete genomefused thiol: disulfide interchange protein: activator of DsbC/hypothetical protein0711
NC_012880:3982383:3984099398409939858111713Dickeya dadantii Ech703, complete genomecytochrome c biogenesis protein transmembrane region0702
NC_012912:4012112:4013884401388440156021719Dickeya zeae Ech1591, complete genomecytochrome c biogenesis protein transmembrane region0698
NC_009832:426993:4521354521354538201686Serratia proteamaculans 568, complete genomeProtein-disulfide reductase0697
NC_011147:4297513:4312808431280843145111704Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein0695
NC_003197:4551880:4567382456738245690851704Salmonella typhimurium LT2, complete genomethiol:disulfide interchange protein precursor0694
NC_016810:4573172:4587963458796345896661704Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbD0694
NC_016856:4563435:4580213458021345819161704Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sthiol:disulfide interchange protein0694
NC_016857:4573173:4587964458796445896671704Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74thiol:disulfide interchange protein0694
NC_016860:4649274:4664776466477646664791704Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein0694
NC_016863:4513106:4527819452781945295221704Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1thiol:disulfide interchange protein0694
NC_017046:4571833:4586624458662445883271704Salmonella enterica subsp. enterica serovar Typhimurium str. 798thiol:disulfide interchange protein DsbD0694
NC_003198:4513900:4543876454387645455791704Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein precursor0693
NC_011080:4543000:4566791456679145684941704Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interchange protein DsbD0692
NC_011205:4564645:4579895457989545815981704Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interchange protein precursor0691
NC_011294:4409137:4422676442267644243791704Salmonella enterica subsp. enterica serovar Enteritidis strthiol:disulfide interchange protein0691
NC_016831:4367000:4380725438072543824281704Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein DsbD0691
NC_013592:577831:5929225929225946701749Dickeya dadantii Ech586, complete genomecytochrome c biogenesis protein transmembrane region0691
NC_020211:379000:3981603981603998841725Serratia marcescens WW4, complete genomethiol:disulfide interchange protein0691
NC_011274:4385039:4400580440058044022831704Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein0689
NC_015761:4188250:4215962421596242176651704Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein DsbD0680
NC_010067:3204682:3204682320468232063851704Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0678
NC_015663:1902344:1927238192723819289621725Enterobacter aerogenes KCTC 2190 chromosome, complete genomethiol:disulfide interchange protein0673
NC_013956:455000:4671364671364688301695Pantoea ananatis LMG 20103 chromosome, complete genomeDsbD0672
NC_006905:4486433:4502083450208345037861704Salmonella enterica subsp. enterica serovar Choleraesuis strthiol:disulfide interchange protein precursor0669
NC_021066:3703725:3705420370542037072221803Raoultella ornithinolytica B6, complete genomethiol:disulfide interchange protein precursor0659
NC_013850:4993307:5017594501759450193901797Klebsiella variicola At-22 chromosome, complete genomecytochrome c biogenesis protein transmembrane region0658
NC_005126:4824500:4828928482892848306551728Photorhabdus luminescens subsp. laumondii TTO1, complete genomethiol:disulfide interchange protein precursor0658
NC_011283:5170683:5195534519553451973301797Klebsiella pneumoniae 342 chromosome, complete genomethiol:disulfide interchange protein0657
NC_014618:4312295:4315600431560043173181719Enterobacter cloacae SCF1 chromosome, complete genomeProtein-disulfide reductase0654
NC_013961:3269368:3272548327254832742631716Erwinia amylovora, complete genomethiol:disulfide interchange protein DsbD0650
NC_007712:532500:5468225468225485941773Sodalis glossinidius str. 'morsitans', complete genomethiol-disulfide interchange protein0645
NC_014541:475350:5289695289695307381770Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c biogenesis protein transmembrane region4e-112405
NC_009850:2169459:2186381218638121881381758Arcobacter butzleri RM4018, complete genomethiol:disulfide interchange protein DsbD8e-80298
NC_015740:2692023:2710392271039227121581767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completethiol:disulfide interchange protein2e-76287
NC_009434:3611738:3659254365925436610171764Pseudomonas stutzeri A1501, complete genomethiol:disulfide interchange protein precursor1e-74281
NC_009439:794498:7944987944987962851788Pseudomonas mendocina ymp, complete genomethiol:disulfide interchange protein precursor8e-73275
NC_015850:548821:5611945611945630591866Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase2e-72274
NC_015850:1947000:1952906195290619547711866Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase2e-72274
NC_012808:1220378:1262514126251412642531740Methylobacterium extorquens AM1, complete genomeputative fused thiol:disulfide interchange protein precursor7e-65248
NC_015850:1060000:1066639106663910685551917Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase2e-64247
NC_012988:670101:6868336868336886051773Methylobacterium extorquens DM4, complete genomefused thiol:disulfide interchange protein1e-63244
NC_002947:4805060:4808445480844548101601716Pseudomonas putida KT2440, complete genomethiol:disulfide interchange protein DsbD2e-55217
NC_015942:763500:7779567779567795061551Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c biogenesis protein transmembrane region2e-52207
NC_010995:3197686:3217795321779532196121818Cellvibrio japonicus Ueda107, complete genomec-type cytochrome biogenesis protein1e-33144
NC_018604:1263927:1286465128646512881741710Brachyspira pilosicoli WesB complete genomethiol disulfide interchange protein2e-26120
NC_003902:624828:6248286248286271342307Xanthomonas campestris pv. campestris str. ATCC 33913, completec-type cytochrome biogenesis protein6e-26119
NC_007086:626891:6268916268916291972307Xanthomonas campestris pv. campestris str. 8004, complete genomec-type cytochrome biogenesis protein6e-26119
NC_019908:463281:4646654646654663741710Brachyspira pilosicoli P43/6/78 chromosome, complete genomethiol disulfide interchange protein1e-25118
NC_014330:169862:1916621916621933711710Brachyspira pilosicoli 95/1000 chromosome, complete genomethiol disulfide interchange protein2e-25117
NC_018607:1505908:1522157152215715238721716Brachyspira pilosicoli B2904 chromosome, complete genomethiol disulfide interchange protein5e-24112
NC_010688:605018:6050186050186073242307Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-21105
NC_010170:4800000:4840287484028748414741188Bordetella petrii, complete genomePutative Thiol:disulfide interchange protein6e-1996.3
NC_014033:1664500:1689845168984516918061962Prevotella ruminicola 23 chromosome, complete genomeputative thiol:disulfide interchange protein6e-1686.3
NC_013209:2248119:2292926229292622951182193Acetobacter pasteurianus IFO 3283-01, complete genomecytochrome c biogenesis thiol:disulfide interchange protein DsbD2e-1584.7
NC_015164:2626503:2629526262952626315231998Bacteroides salanitronis DSM 18170 chromosome, complete genomeProtein-disulfide reductase1e-1482.4
NC_008571:3165143:3179924317992431819662043Gramella forsetii KT0803, complete genomethiol:disulfide interchange protein DsbD 22e-1378.2
NC_007645:3688000:3695752369575236979112160Hahella chejuensis KCTC 2396, complete genomeThiol:disulfide interchange protein2e-1377.8
NC_007712:1262593:1285352128535212873552004Sodalis glossinidius str. 'morsitans', complete genomesuppressor for copper-sensitivity B1e-1172.4
NC_010995:3745957:3749844374984437519012058Cellvibrio japonicus Ueda107, complete genomethiol-disulfide interchange protein DsbD homolog1e-1172
NC_007907:5297477:530698653069865307675690Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1067
NC_018866:154252:160450160450161142693Dehalobacter sp. DCA chromosome, complete genomeputative cytochrome c biogenesis protein1e-0965.1
NC_007907:4714844:472599347259934726694702Desulfitobacterium hafniense Y51, complete genomeputative cytochrome c biogenesis protein2e-0964.3
NC_011830:1288984:131408013140801314781702Desulfitobacterium hafniense DCB-2, complete genomecytochrome c biogenesis protein transmembrane region1e-0862
NC_016628:1:1624616246182642019Vibrio furnissii NCTC 11218 chromosome 2, complete sequencecytochrome c biogenesis protein, transmembrane region3e-0757.4
NC_017025:1761918:178158917815891782029441Flavobacterium indicum GPTSA100-9, complete genomeThioredoxin family protein1e-0655.5