Pre_GI: BLASTP Hits

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Query: NC_004547:667988:689713 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 689713, End: 690303, Length: 591

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:5310339:532627353262735326893621Pseudomonas syringae pv. phaseolicola 1448A, complete genometransporter, LysE family2e-34145
NC_009665:1831674:184720818472081847801594Shewanella baltica OS185 chromosome, complete genomelysine exporter protein LysE/YggA1e-2099.4
NC_014540:1835493:185317018531701853796627Burkholderia sp. CCGE1003 chromosome 2, complete sequencelysine exporter protein LysE/YggA7e-2097.1
NC_009348:3819271:384336238433623843952591Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-1996.3
NC_007511:3512100:352625035262503526864615Burkholderia sp. 383 chromosome 2, complete sequenceLysine exporter family protein (LYSE/YGGA)3e-1995.1
NC_010552:58294:636696366964286618Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)1e-1893.2
NC_010515:1428664:144540714454071446024618Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)9e-1993.2
NC_011001:63986:693316933169948618Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transporter-LysE family1e-1892.8
NC_009255:2044291:206944520694452070068624Burkholderia vietnamiensis G4 chromosome 2, complete sequencelysine exporter protein LysE/YggA2e-1892
NC_008686:1383891:140035314003531400946594Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)1e-1789.4
NC_008543:2871747:287634728763472876964618Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)2e-1789
NC_008061:2368517:239002123900212390638618Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)2e-1789
NC_007347:3204637:323485932348593235485627Ralstonia eutropha JMP134 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)2e-1789
NC_014364:894373:897103897103897699597Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)4e-1787.8
NC_014532:2298628:229862822986282299227600Halomonas elongata DSM 2581, complete genomehypothetical protein6e-1787
NC_018643:857911:887828887828888418591Alpha proteobacterium HIMB5 chromosome, complete genomeLysE type translocator2e-1685.1
NC_012917:4328463:433043543304354331037603Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLysine exporter protein (LYSE/YGGA)6e-1684
NC_016002:1326500:135045813504581351036579Pseudogulbenkiania sp. NH8B, complete genomelysine exporter protein LysE/YggA7e-1477
NC_020126:2216926:222263522226352223243609Myxococcus stipitatus DSM 14675, complete genomelysine Exporter protein LysE/YggA2e-1375.5
NC_009348:3819271:384406838440683844664597Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-1273.2
NC_015424:748785:772587772587773183597Aeromonas veronii B565 chromosome, complete genomehypothetical protein1e-1272.8
NC_016935:3103430:311113131111313111706576Paenibacillus mucilaginosus 3016 chromosome, complete genomelysine exporter protein LysE/YggA9e-1270.1
NC_015690:2553837:256160425616042562179576Paenibacillus mucilaginosus KNP414 chromosome, complete genomelysine exporter protein LysE/YggA1e-1170.1
NC_015424:748785:773381773381773899519Aeromonas veronii B565 chromosome, complete genomeLysine exporter protein2e-1168.9
NC_007643:4294818:430960843096084310132525Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein3e-1168.2
NC_010552:1212000:123158812315881232193606Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)5e-1167.8
NC_020541:2850831:285227328522732852869597Rhodanobacter sp. 2APBS1, complete genomeputative threonine efflux protein6e-1167
NC_014624:1369642:137157213715721372153582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0963.2
NC_011769:247202:262238262238262888651Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeLysine exporter protein (LYSE/YGGA)2e-0962.4
NC_006322:567987:584818584818585396579Bacillus licheniformis ATCC 14580, complete genomeLysE3e-0962
NC_006270:568171:585028585028585606579Bacillus licheniformis ATCC 14580, complete genomeLysine exporter protein3e-0962
NC_014541:3927500:394089639408963941504609Ferrimonas balearica DSM 9799 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-0961.6
NC_009654:3316458:333297633329763333587612Marinomonas sp. MWYL1, complete genomelysine exporter protein LysE/YggA1e-0756.2
NC_012660:4669500:468801746880174688625609Pseudomonas fluorescens SBW25 chromosome, complete genomeputative amino acid efflux protein2e-0755.5
NC_015588:2200517:221407022140702214711642Isoptericola variabilis 225 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-0755.5
NC_020410:3868573:387097138709713871549579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeLysine exporter protein5e-0754.3
NC_010322:4623867:462621246262124626829618Pseudomonas putida GB-1 chromosome, complete genomelysine exporter protein LysE/YggA5e-0754.3
NC_014623:7963238:798199979819997982655657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelysine exporter family protein7e-0753.9
NC_012559:978419:993730993730994341612Laribacter hongkongensis HLHK9, complete genomeProbable transporter, LysE family protein9e-0753.5
NC_011000:2514897:252979325297932530422630Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative homoserine/homoserine lactone efflux protein2e-0652.8
NC_019842:3921424:392142439214243922128705Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-0652.8
NC_004603:1464000:146416614641661464825660Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative homoserine/homoserine lactone efflux protein1e-0652.8
NC_015434:2527412:255327525532752553871597Verrucosispora maris AB-18-032 chromosome, complete genomelysine exporter protein LysE/YggA1e-0652.8
NC_020244:4020315:402328040232804023831552Bacillus subtilis XF-1, complete genomelysine exporter protein1e-0652.8
NC_012856:207194:209129209129209770642Ralstonia pickettii 12D chromosome 1, complete genomeLysine exporter protein (LYSE/YGGA)2e-0652.4
NC_007963:3225306:323184032318403232460621Chromohalobacter salexigens DSM 3043, complete genomeLysine exporter protein (LYSE/YGGA)5e-0650.8
NC_020260:2725201:273941027394102740054645Cronobacter sakazakii Sp291, complete genomeleucine export protein LeuE5e-0650.8
NC_015497:2859724:286329828632982863918621Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)6e-0650.8
NC_018679:2541986:255159925515992552213615Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completelysine exporter protein LysE/YggA7e-0650.4