Pre_GI: BLASTP Hits

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Query: NC_004547:667988:687380 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 687380, End: 688402, Length: 1023

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:4482500:4486861448686144878921032Serratia proteamaculans 568, complete genomeintegrase family protein6e-106384
NC_013892:1503162:1513287151328715142941008Xenorhabdus bovienii SS-2004 chromosome, complete genometyrosine recombinase-like8e-103374
NC_014228:3391500:3392691339269133936981008Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase1e-101369
NC_014228:3505320:3510397351039735114131017Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase3e-98358
NC_009832:426993:4500724500724510851014Serratia proteamaculans 568, complete genomeintegrase family protein3e-83308
NC_009832:4564752:4572097457209745731101014Serratia proteamaculans 568, complete genomeintegrase family protein2e-82306
NC_014029:331919:4017584017584027711014Yersinia pestis Z176003 chromosome, complete genomeintegrase8e-82303
NC_016832:4482437:4499858449985845008711014Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase4e-78291
NC_003198:4513900:4528781452878145297941014Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage integrase4e-78291
NC_004631:4494000:4511590451159045126031014Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable phage integrase4e-78291
NC_013421:701005:744192744192745166975Pectobacterium wasabiae WPP163, complete genomeintegrase family protein3e-77288
NC_012214:537000:557388557388558347960Erwinia pyrifoliae Ep1/96, complete genomeintegrase2e-71270
NC_016845:4498097:450306445030644503864801Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Phage integrase8e-61234
NC_010554:2789722:2793999279399927950691071Proteus mirabilis HI4320, complete genomephage integrase3e-60232
NC_011149:4677412:467964346796434680569927Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase2e-51202
NC_010067:3056774:307494730749473075873927Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-49197
NC_011745:3405520:342713034271303427705576Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-49196
NC_009656:4527457:4657608465760846589571350Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase6e-45181
NC_021150:3698696:3720275372027537215221248Azotobacter vinelandii CA6, complete genomephage integrase1e-43177
NC_012560:3698697:3720276372027637215231248Azotobacter vinelandii DJ, complete genomephage integrase1e-43177
NC_009656:4527457:4572105457210545733881284Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase5e-43175
NC_007005:1605000:1607964160796416093701407Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase4e-42172
NC_008463:4566976:4589452458945245907321281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase4e-42172
NC_004578:895019:8995348995349009911458Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-41171
NC_004129:5481629:5491834549183454931711338Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family2e-38159
NC_014532:3596097:3632063363206336330971035Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family7e-37154
NC_012962:3864000:3866446386644638676481203Photorhabdus asymbiotica, complete genomeProbable phage integrase6e-31134
NC_012913:1041969:106300810630081063919912Aggregatibacter aphrophilus NJ8700, complete genomeintegrase6e-29128
NC_005773:866157:8716228716228728391218Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-28125
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein8e-28124
NC_014228:3391500:340640634064063406693288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-26120
NC_007005:830467:8359468359468371091164Pseudomonas syringae pv. syringae B728a, complete genome2e-26119
NC_018691:2214464:221498022149802215912933Alcanivorax dieselolei B5 chromosome, complete genomeTyrosine recombinase xerC-like protein1e-24114
NC_012962:3864000:386616338661633866405243Photorhabdus asymbiotica, complete genomeputative integrase-like protein8e-21101
NC_009792:3245368:326544332654433265901459Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-20100
NC_010939:1986263:200437920043792004945567Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative integrase5e-2098.6
NC_006155:3805640:381032338103233810631309Yersinia pseudotuberculosis IP 32953, complete genome7e-1581.6
NC_003143:1059580:106425410642541064562309Yersinia pestis CO92, complete genomeintegrase (partial)7e-1581.6
NC_008149:3556999:356015835601583560406249Yersinia pestis Nepal516, complete genomeintegrase1e-1480.9
NC_009792:3245368:326593832659383266234297Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1377.4
NC_007005:830467:837051837051837347297Pseudomonas syringae pv. syringae B728a, complete genome1e-1170.9
NC_012660:4734363:474106147410614741222162Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1168.9
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD9e-1064.7
NC_010510:388885:401104401104402021918Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein3e-0652.8