Pre_GI: BLASTP Hits

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Query: NC_004547:667988:684912 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 684912, End: 685403, Length: 492

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:1142607:116248711624871162978492Enterobacter cloacae EcWSU1 chromosome, complete genomedinB family protein7e-85312
NC_014306:4901390:491727649172764917764489Erwinia billingiae Eb661, complete genomeDinB family protein6e-63239
NC_013283:113660:108521085211340489Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein1e-51202
NC_015424:3277292:328276932827693283293525Aeromonas veronii B565 chromosome, complete genomeDinB family1e-38158
NC_014153:2187409:219691221969122197457546Thiomonas intermedia K12 chromosome, complete genomeDinB family protein2e-28124
NC_015566:5197624:521033252103325210904573Serratia sp. AS12 chromosome, complete genomeDinB family protein3e-25114
NC_009832:5214850:522839052283905228962573Serratia proteamaculans 568, complete genomeDinB family protein2e-24111
NC_012660:2431803:2443804244380424451501347Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-24110
NC_009439:2427120:243550624355062436027522Pseudomonas mendocina ymp, complete genomeDinB family protein2e-1685.1
NC_020126:7372685:738366373836637384196534Myxococcus stipitatus DSM 14675, complete genomehypothetical protein4e-1580.5
NC_015379:3736500:375217537521753752657483Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative protein dinB1e-1478.6
NC_016830:3230939:324048832404883240823336Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-1065.9