Pre_GI: BLASTP Hits

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Query: NC_004547:667988:683332 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 683332, End: 684792, Length: 1461

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:346998:3756613756613771331473Edwardsiella ictaluri 93-146, complete genomeDNA helicase0656
NC_009832:4482500:4489655448965544911001446Serratia proteamaculans 568, complete genomehypothetical protein0639
NC_014029:331919:3985423985423999871446Yersinia pestis Z176003 chromosome, complete genomehelicase IV0637
NC_009801:3374501:3376149337614933776781530Escherichia coli E24377A, complete genomehypothetical protein9e-178623
NC_004631:4494000:4508342450834245098531512Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative DNA helicase5e-159561
NC_003198:4513900:4525533452553345270441512Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA helicase5e-159561
NC_012125:4559990:4574162457416245756731512Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA helicase5e-159561
NC_016832:4482437:4496610449661044981211512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DNA helicase5e-159561
NC_007005:1636875:1638691163869116401541464Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-105382
NC_004578:934867:9503879503879518441458Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-104378
NC_018080:5091772:5157875515787551593561482Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA helicase6e-101368
NC_009656:4527457:4632866463286646343471482Pseudomonas aeruginosa PA7 chromosome, complete genomeDNA helicase2e-100366
NC_004129:5373886:5428460542846054299201461Pseudomonas fluorescens Pf-5, complete genomehypothetical protein6e-100364
NC_008463:5313527:5328614532861453300951482Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative helicase4e-98358
NC_016603:3475843:3492753349275334942551503Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeputative DNA helicase9e-45181
NC_008757:111292:1138381138381155051668Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completesuperfamily I DNA and RNA helicases-like protein3e-43176
NC_016109:8761557:8772362877236287747732412Kitasatospora setae KM-6054, complete genomeputative helicase4e-43176
NC_016109:1:85068506109172412Kitasatospora setae KM-6054, complete genomeputative helicase4e-43176
NC_010682:1652636:1658054165805416595141461Ralstonia pickettii 12J chromosome 1, complete sequenceputative DNA helicase2e-42173
NC_008255:4043045:4062538406253840643401803Cytophaga hutchinsonii ATCC 33406, complete genomesuperfamily I DNA and RNA helicase1e-40168
NC_010572:8493946:8522221852222185236901470Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA helicase3e-38159
NC_010572:1:2224022240237091470Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA helicase3e-38159
NC_018679:1738126:1747871174787117499672097Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeUvrD/REP helicase1e-27125
NC_014377:1943476:1963225196322519652762052Thermosediminibacter oceani DSM 16646 chromosome, complete genomeUvrD/REP helicase6e-25115