Pre_GI: BLASTP Hits

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Query: NC_004547:611178:632961 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 632961, End: 634493, Length: 1533

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:331919:3688703688703703661497Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-155548
NC_009832:4521585:4546684454668445481801497Serratia proteamaculans 568, complete genomehypothetical protein2e-152539
NC_015566:316340:3384853384853399811497Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein5e-148525
NC_013892:1483000:1489064148906414904941431Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-142506
NC_014228:3534378:3541470354147035429001431Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-141503
NC_013892:3278647:3307542330754233089721431Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-140499
NC_010554:2789722:2818068281806828195641497Proteus mirabilis HI4320, complete genomehypothetical protein3e-138492
NC_009708:4182460:4185720418572041872371518Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-125450
NC_016830:3869572:3912831391283139143481518Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-92339
NC_012660:2045398:2105129210512921066461518Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-89330
NC_015422:1876102:1898989189898919004221434Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein1e-88327
NC_012912:483390:5048125048125062121401Dickeya zeae Ech1591, complete genomeputative secreted protein1e-88327
NC_011662:1017933:1041725104172510431581434Thauera sp. MZ1T, complete genomehypothetical protein1e-88327
NC_011662:1041725:1041725104172510431581434Thauera sp. MZ1T, complete genomehypothetical protein1e-88327
NC_004129:5373886:5433332543333254348281497Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-88325
NC_009656:4527457:4639375463937546408801506Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-87322
NC_012731:600518:6035016035016047961296Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-87322
NC_006513:1379735:1438891143889114403481458Azoarcus sp. EbN1, complete genomehypothetical protein8e-87321
NC_015726:2862500:2881769288176928832351467Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein1e-86320
NC_010170:1498253:1540390154039015418081419Bordetella petrii, complete genomehypothetical protein2e-86320
NC_003919:2639080:2657818265781826592901473Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-86320
NC_008463:5313527:5335128533512853366331506Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein8e-86318
NC_011901:2983555:2996607299660729980251419Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-85315
NC_011992:1213726:1229005122900512304231419Acidovorax ebreus TPSY, complete genomehypothetical protein2e-84313
NC_009138:1974935:2025029202502920264591431Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-84313
NC_008344:49039:8784587845892421398Nitrosomonas eutropha C91, complete genomeputative secreted protein2e-84313
NC_018080:5091772:5164434516443451658911458Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-84313
NC_012691:2614603:2665425266542526668341410Tolumonas auensis DSM 9187, complete genomeputative secreted protein4e-83309
NC_016809:112410:1124101124101138101401Haemophilus influenzae 10810, complete genomeexported protein6e-83308
NC_015379:2417312:2443010244301024444461437Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein1e-81304
NC_021150:3667176:3689791368979136912781488Azotobacter vinelandii CA6, complete genomehypothetical protein1e-81304
NC_012560:3667177:3689792368979236912791488Azotobacter vinelandii DJ, complete genomehypothetical protein1e-81304
NC_015572:2186394:2220983222098322223861404Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein6e-70265
NC_008752:3007073:3031263303126330327171455Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-47190