Pre_GI: BLASTP Hits

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Query: NC_004547:611178:631033 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 631033, End: 631395, Length: 363

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:3278647:330569233056923306066375Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-28124
NC_013892:1483000:149197014919701492344375Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-28124
NC_014228:3534378:353962035396203539994375Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-28124
NC_009832:4521585:454975545497554550120366Serratia proteamaculans 568, complete genomehypothetical protein2e-25114
NC_014029:331919:366936366936367301366Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-25114
NC_015566:316340:336551336551336916366Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-25114
NC_010554:2789722:282109128210912821507417Proteus mirabilis HI4320, complete genomehypothetical protein2e-1890.9
NC_009708:4182460:418874741887474189121375Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1477.8
NC_013716:3512950:353706335370633537416354Citrobacter rodentium ICC168, complete genomehypothetical protein2e-1271.2
NC_012731:600518:606213606213606566354Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-0856.6
NC_015572:2186394:221909822190982219475378Methylomonas methanica MC09 chromosome, complete genomeconjugative transfer region protein3e-0753.5