Pre_GI: BLASTP Hits

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Query: NC_004547:611178:630416 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 630416, End: 630655, Length: 240

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3391500:342810934281093428345237Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1581.6
NC_005126:1223042:125213212521321252368237Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1581.6
NC_013892:3278647:330503233050323305268237Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1580.9
NC_014228:3534378:353896035389603539196237Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1580.1
NC_013892:1483000:149276814927681493004237Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-1478.6
NC_009832:4521585:455056245505624550798237Serratia proteamaculans 568, complete genomehypothetical protein4e-1373.6
NC_009832:358291:381855381855382097243Serratia proteamaculans 568, complete genomehypothetical protein7e-1269.3
NC_015567:313035:336041336041336283243Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein8e-1268.9
NC_015566:316340:335876335876336118243Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein8e-1268.9