Pre_GI: BLASTP Hits

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Query: NC_004547:611178:625127 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 625127, End: 625744, Length: 618

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:331919:361698361698362324627Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-55214
NC_009832:358291:377057377057377647591Serratia proteamaculans 568, complete genomerestriction endonuclease2e-52205
NC_015567:313035:331670331670332266597Serratia sp. AS9 chromosome, complete genomerestriction endonuclease5e-50197
NC_015566:316340:331505331505332101597Serratia sp. AS12 chromosome, complete genomerestriction endonuclease5e-50197