Pre_GI: BLASTP Hits

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Query: NC_004547:611178:623308 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 623308, End: 624021, Length: 714

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:358291:375152375152375862711Serratia proteamaculans 568, complete genomehypothetical protein3e-83308
NC_014029:331919:359793359793360503711Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-82305
NC_015566:316340:329606329606330316711Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein2e-82305
NC_015567:313035:329771329771330481711Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein2e-82305
NC_013892:3278647:329886132988613299559699Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-71269
NC_013892:1483000:149761214976121498307696Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-70263
NC_014228:3391500:342173034217303422425696Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-69260
NC_009708:4182460:419880341988034199621819Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-67254
NC_005126:1223042:124369012436901244427738Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-67253
NC_016845:4539381:454257545425754543192618Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-59229
NC_007005:1636875:164416916441691644915747Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-46186
NC_008752:558828:573957573957574715759Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-43176
NC_012691:2614603:265614726561472656875729Tolumonas auensis DSM 9187, complete genomeputative secreted protein4e-43174
NC_012731:600518:618067618067618741675Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-43174
NC_020181:3328844:334448433444843345134651Enterobacter aerogenes EA1509E, complete genomeFIG00509784: hypothetical protein7e-43173
NC_013716:3512950:354341635434163544066651Citrobacter rodentium ICC168, complete genomeputative conjugative transfer system protein TraG5e-42171
NC_003919:2639080:263833126383312639095765Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-38160
NC_010170:1498253:153197015319701532689720Bordetella petrii, complete genomeconserved protein, putatively exported2e-37155
NC_012912:483390:516548516548517255708Dickeya zeae Ech1591, complete genomeputative secreted protein4e-37154
NC_015422:1876102:187539818753981876117720Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein4e-37154
NC_006513:1379735:146021714602171460954738Azoarcus sp. EbN1, complete genomehypothetical protein1e-36152
NC_008782:2326439:234563123456312346350720Acidovorax sp. JS42, complete genomeputative secreted protein2e-36152
NC_008825:2525380:254304225430422543761720Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-36152
NC_011662:1058794:106209410620941062813720Thauera sp. MZ1T, complete genomehypothetical protein2e-36152
NC_009656:4527457:462704246270424627794753Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-36151
NC_010002:4544818:455892545589254559662738Delftia acidovorans SPH-1, complete genomeputative secreted protein4e-36151
NC_010170:4533416:453673745367374537474738Bordetella petrii, complete genomeconserved protein, putatively exported4e-36151
NC_018080:5091772:515204751520475152802756Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein9e-36150
NC_009138:1974935:201147420114742012199726Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide7e-36150
NC_016830:3869572:392636039263603927079720Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-34146
NC_014532:3555550:357296335729633573721759Halomonas elongata DSM 2581, complete genomehypothetical protein2e-34145
NC_008344:49039:975669756698294729Nitrosomonas eutropha C91, complete genomehypothetical protein7e-33140
NC_004129:5373886:542344454234445424187744Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-31134
NC_015379:2417312:245149924514992452218720Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein4e-31134
NC_011992:1234610:123735312373531238078726Acidovorax ebreus TPSY, complete genomeputative secreted protein4e-31134
NC_015572:2186394:219760721976072198383777Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein8e-29127
NC_007484:667879:676468676468677286819Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-27122
NC_008739:41793:417934179342569777Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein2e-1479