Pre_GI: BLASTP Hits

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Query: NC_004547:442927:477432 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 477432, End: 478562, Length: 1131

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:2230000:2234967223496722361001134Enterobacteriaceae bacterium strain FGI 57, complete genomeSecretory lipase1e-120433
NC_008027:3677500:3686826368682636880491224Pseudomonas entomophila L48, complete genomehypothetical protein6e-60231
NC_012590:37697:3972139721410311311Corynebacterium aurimucosum ATCC 700975, complete genomeputative secreted protein5e-38158
NC_015410:3093465:3123389312338931246631275Pseudomonas mendocina NK-01 chromosome, complete genomeputative secretory lipase6e-28125
NC_018581:3871000:3872050387205038733481299Gordonia sp. KTR9 chromosome, complete genomehypothetical protein7e-23108
NC_014168:224227:2454812454812466861206Segniliparus rotundus DSM 44985 chromosome, complete genomesecretory lipase4e-22105
NC_021177:7815791:7832315783231578335381224Streptomyces fulvissimus DSM 40593, complete genomeTriacylglycerol lipase1e-1274.3
NC_007164:1090858:1108233110823311094921260Corynebacterium jeikeium K411, complete genomeputative secreted protein1e-1171.2
NC_008313:959638:9650259650259662511227Ralstonia eutropha H16 chromosome 1, complete sequencesecretory lipase1e-1067.8
NC_016786:2017267:2027065202706520283361272Corynebacterium diphtheriae HC01 chromosome, complete genomeputative secretory lipase2e-0860.8
NC_016787:2009991:2024091202409120253621272Corynebacterium diphtheriae HC03 chromosome, complete genomeputative secretory lipase2e-0860.8
NC_016802:2035723:2045528204552820467991272Corynebacterium diphtheriae HC02 chromosome, complete genomeputative exported lipase2e-0860.8
NC_016788:2054739:2064542206454220658101269Corynebacterium diphtheriae HC04 chromosome, complete genomeputative exported lipase3e-0859.7
NC_016788:2007721:2017524201752420187921269Corynebacterium diphtheriae HC04 chromosome, complete genomeputative secretory lipase3e-0859.7
NC_016790:1976593:1990218199021819914861269Corynebacterium diphtheriae VA01 chromosome, complete genomeputative exported lipase3e-0859.7
NC_015677:3179910:3208198320819832095591362Ramlibacter tataouinensis TTB310 chromosome, complete genomelipase4e-0859.3
NC_002935:2059672:2069482206948220707531272Corynebacterium diphtheriae NCTC 13129, complete genomePutative exported lipase5e-0858.9
NC_003902:3514000:3518923351892335200711149Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein4e-0756.2
NC_014910:4316706:4334967433496743365261560Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-0653.9