Pre_GI: BLASTP Hits

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Query: NC_004547:442927:467142 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 467142, End: 467654, Length: 513

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:443398:445076445076445606531Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative kinase2e-69261
NC_014562:1935088:194206419420641942567504Pantoea vagans C9-1 chromosome, complete genomePutative adenylate kinase9e-44176
NC_011985:3282924:329772232977223298231510Agrobacterium radiobacter K84 chromosome 1, complete genomehypothetical protein1e-42172
NC_010505:5035668:504742650474265047953528Methylobacterium radiotolerans JCM 2831, complete genomekinase1e-39162
NC_016830:2247789:226535122653512265857507Pseudomonas fluorescens F113 chromosome, complete genomechloramphenicol phosphotransferase family protein2e-35147
NC_015497:2831148:284524628452462845752507Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomekinase3e-35147
NC_012791:4794362:480082248008224801019198Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein8e-0856.6