Pre_GI: BLASTP Hits

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Query: NC_004547:442927:457211 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 457211, End: 457861, Length: 651

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:1650523:165599816559981656657660Erwinia pyrifoliae Ep1/96, complete genomePredicted membrane protein3e-68258
NC_013715:1606396:161102616110261611841816Rothia mucilaginosa DY-18, complete genomepredicted membrane protein3e-1995.1
NC_013520:1638000:165331616533161654035720Veillonella parvula DSM 2008, complete genomeprotein of unknown function DUF4213e-1788.2
NC_016047:876875:897375897375898070696Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-1376.6
NC_014639:227118:245731245731246426696Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-1376.3
CP002207:227118:245731245731246426696Bacillus atrophaeus 1942, complete genomehypothetical protein1e-1376.3
UCMB5137:303641:324233324233324934702Bacillus atrophaeus UCMB-5137hypothetical protein1e-1376.3
NC_015873:2197412:221494622149462215599654Megasphaera elsdenii DSM 20460, complete genomehypothetical protein1e-1170.1
NC_014976:2981777:300227730022773002972696Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein3e-1168.9
NC_014479:736102:754650754650755345696Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein3e-1168.6
NC_020063:2011019:202069620206962021331636Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein7e-1167.4
NC_015968:1618862:163208316320831632718636Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein8e-1167
NC_021066:1712905:172366917236691724304636Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1065.9
NC_008497:447427:458914458914459552639Lactobacillus brevis ATCC 367, complete genomePredicted membrane protein3e-1065.5
NC_011969:1816746:182195618219561822642687Bacillus cereus Q1 chromosome, complete genomehypothetical protein5e-1064.3
NC_019978:2506472:250685825068582507553696Halobacteroides halobius DSM 5150, complete genomehypothetical protein3e-0962
NC_016779:1688946:169418316941831694869687Bacillus cereus F837/76 chromosome, complete genomehypothetical protein3e-0962
NC_011772:1684404:170482017048201705506687Bacillus cereus G9842, complete genomehypothetical protein4e-0961.6
NC_010382:3783879:380621638062163806866651Lysinibacillus sphaericus C3-41, complete genomehypothetical protein8e-0960.5
NC_009725:692237:715821715821716510690Bacillus amyloliquefaciens FZB42, complete genomeYetF4e-0754.7
NC_019842:680000:705528705528706217690Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-0754.7
NC_016584:5420823:544254454425445443266723Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein1e-0653.5
NC_017191:641923:660684660684661373690Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein1e-0653.1
NC_020272:3245834:324766732476673248356690Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein1e-0653.1
NC_017294:1385576:138557613855761386217642Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehypothetical protein1e-0653.1
NC_014551:691594:711338711338712027690Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0653.1
NC_017188:635901:654662654662655351690Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein1e-0653.1
NC_017190:678089:696849696849697538690Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein1e-0653.1
NC_013791:1507943:152445515244551525150696Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein5e-0651.2
NC_013205:747502:765816765816766676861Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF4217e-0650.8