Pre_GI: BLASTP Hits

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Query: NC_004547:442927:456426 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 456426, End: 456719, Length: 294

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1613818:161819316181931618849657Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-24111
NC_014306:1981956:2006198200619820083692172Erwinia billingiae Eb661, complete genomePutative hemolysin3e-22103
NC_012962:1661683:167880016788001679423624Photorhabdus asymbiotica, complete genomesimilar to haemagluttinin from E.coli-cdia2e-1271.2
NC_012779:3176820:3207242320724232135146273Edwardsiella ictaluri 93-146, complete genomefilamentous hemagglutinin, N-:Adhesin HecA 20-residue repeat x22e-0960.8
NC_014306:1981956:200360820036082004204597Erwinia billingiae Eb661, complete genomehypothetical protein3e-0960.5
NC_013508:876431:897612897612897872261Edwardsiella tarda EIB202, complete genomehypothetical protein1e-0755.1