Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3242492 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3242492, End: 3242674, Length: 183

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014973:3414459:342392134239213424094174Geobacter sp. M18 chromosome, complete genomehypothetical protein5e-1476.3
NC_006350:1084930:109281310928131092992180Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein6e-1269.3
NC_013450:854790:860955860955861125171Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein1e-1065.1
NC_011892:77975:118621118621118779159Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completehypothetical protein1e-1064.7
NC_011138:3881446:390344739034473903620174Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein3e-0857.4
NC_007645:6407370:641789764178976418073177Hahella chejuensis KCTC 2396, complete genomehypothetical protein4e-0857
NC_008322:2077628:211316821131682113341174Shewanella sp. MR-7, complete genomehypothetical protein8e-0752.4
NC_010512:1015557:103558810355881035764177Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein3e-0650.8
NC_008740:443274:478677478677478841165Marinobacter aquaeolei VT8, complete genome6e-0649.7