Pre_GI: BLASTP Hits

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Query: NC_004547:2285092:2288706 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2288706, End: 2289281, Length: 576

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:2479814:249587024958702496490621Dickeya dadantii 3937 chromosome, complete genomehypothetical protein8e-67252
NC_013956:1762171:180020818002081800783576Pantoea ananatis LMG 20103 chromosome, complete genomeYceI5e-55213
NC_009436:3367194:338843133884313388982552Enterobacter sp. 638, complete genomeYceI family protein9e-47186
NC_016514:3573400:360407236040723604629558Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-42170
NC_011283:2185462:219002221900222190600579Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein6e-1580.5
NC_013850:2103469:212356621235662124144579Klebsiella variicola At-22 chromosome, complete genomeYceI family protein7e-1580.5
NC_016147:513819:518531518531519109579Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein6e-1477
NC_014394:1626699:162669916266991627265567Gallionella capsiferriformans ES-2 chromosome, complete genomeYceI family protein2e-1375.9
NC_016612:5231065:525829552582955258765471Klebsiella oxytoca KCTC 1686 chromosome, complete genomeYceI protein3e-1271.6
NC_015942:447308:460992460992461636645Acidithiobacillus ferrivorans SS3 chromosome, complete genomeYceI family protein2e-1168.9
NC_010943:493002:493679493679494386708Stenotrophomonas maltophilia K279a, complete genomehypothetical protein5e-1167.4
NC_014623:1273025:128503512850351285616582Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelipid/polyisoprenoid-binding, ycei-like family protein3e-0961.6
NC_017030:6558624:656266065626606563205546Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein6e-0960.5
NC_014623:9492000:950002295000229500573552Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeYceI-like family protein1e-0756.2
NC_009468:38112:476134761348353741Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequenceYceI family protein8e-0753.5
NC_010175:2488000:250502025050202505568549Chloroflexus aurantiacus J-10-fl, complete genomeYceI family protein1e-0653.1
NC_013124:1784117:180645418064541807005552Acidimicrobium ferrooxidans DSM 10331, complete genomeYceI family protein5e-0650.8
NC_014830:3387479:339104733910473391658612Intrasporangium calvum DSM 43043 chromosome, complete genomeYceI family protein1e-0550.1