Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:1873390:1894837 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1894837, End: 1895358, Length: 522

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:947281:961813961813962604792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-57220
NC_011294:2053991:208085220808522081643792Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-57220
NC_011274:2044000:207198020719802072771792Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-57220
NC_011205:2180598:220786722078672208658792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-57219
NC_011149:1987291:201405220140522014852801Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-56219
NC_011745:2209288:226054622605462261346801Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-46184
NC_011601:2139188:215113121511312151427297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-33142