Pre_GI: BLASTP Hits

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Query: NC_004547:164000:174161 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 174161, End: 174907, Length: 747

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4790696:480484548048454805594750Pectobacterium wasabiae WPP163, complete genomeglycosyl transferase family 255e-95347
NC_013508:2356865:238599523859952386750756Edwardsiella tarda EIB202, complete genomeputative beta 1,4-galactosyltransferase2e-31135
NC_012779:2424967:244714824471482447891744Edwardsiella ictaluri 93-146, complete genomeputative beta1,4-galactosyltransferase2e-30132
NC_017280:1075435:108974210897421090515774Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomehypothetical protein1e-0757
NC_012779:1286500:129732112973211298106786Edwardsiella ictaluri 93-146, complete genomeputative glycosyltransferase3e-0755.8