Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1200769 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1200769, End: 1200996, Length: 228

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:3013838:304238730423873042623237Escherichia coli E24377A, complete genome4-hydroxybenzoate decarboxylase, subunit D2e-29127
NC_013956:1810026:181617918161791816406228Pantoea ananatis LMG 20103 chromosome, complete genomeKdpD6e-29125
NC_007644:362000:387322387322387549228Moorella thermoacetica ATCC 39073, complete genomevanillic acid non-oxidative decarboxylation gene-like3e-0753.9