Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1197376 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1197376, End: 1198215, Length: 840

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016816:1545354:156224015622401563058819Pantoea ananatis LMG 5342, complete genomehypothetical protein7e-53207
NC_014306:1810548:181989318198931820864972Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein5e-46184
NC_020064:3825916:383653038365303837336807Serratia marcescens FGI94, complete genomehypothetical protein2e-35149
NC_016816:3952000:396547739654773966304828Pantoea ananatis LMG 5342, complete genomehypothetical protein3e-34145
NC_014121:1101093:112192711219271122721795Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein7e-30130
NC_013285:1:122351223513038804Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein4e-22105
NC_008800:2592500:260697726069772607462486Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative inner membrane protein3e-21102
NC_020064:2921809:293383529338352934602768Serratia marcescens FGI94, complete genomehypothetical protein2e-21102
NC_013892:3278647:327864732786473279243597Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-21100
NC_008800:2592500:260747226074722607768297Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative inner membrane protein8e-1994.4
NC_008027:2051821:206204220620422062755714Pseudomonas entomophila L48, complete genomehypothetical protein4e-1892
NC_012962:1827000:184777418477741848559786Photorhabdus asymbiotica, complete genomehypothetical protein2e-1376.6
NC_013421:2453078:246354024635402464385846Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-0858.9