Pre_GI: BLASTP Hits

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Query: NC_004463:2262467:2304035 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2304035, End: 2304241, Length: 207

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:7917586:797394679739467974182237Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-23108
NC_017249:18493:3729937299392811983Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein2e-1580.9
NC_004463:18497:3730537305393322028Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein2e-1580.9
NC_009719:1972545:1984249198424919863122064Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer coupling protein TraG3e-1580.5
NC_009720:4406991:4434900443490044368791980Xanthobacter autotrophicus Py2, complete genomeconjugal transfer coupling protein TraG4e-1580.1
NC_014834:959986:9681419681419701261986Rhodopseudomonas palustris DX-1 chromosome, complete genomeTRAG family protein5e-1579.7
NC_015381:2859000:2881633288163328836362004Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugal transfer protein TraG9e-1579
NC_003295:2787371:2792029279202927940562028Ralstonia solanacearum GMI1000, complete genomePROBABLE PLASMID CONJUGATION TRAG TRANSMEMBRANE PROTEIN1e-1478.6
NC_010943:1332243:1334372133437213363722001Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein2e-1478.2
NC_011992:3752867:3757497375749737595002004Acidovorax ebreus TPSY, complete genomeTRAG family protein2e-1478.2
NC_011365:1135750:1154211115421111561931983Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer coupling protein TraG2e-1478.2
NC_010002:2933909:2969111296911129711202010Delftia acidovorans SPH-1, complete genomeTRAG family protein2e-1478.2
NC_008577:1489643:1491078149107814930751998Shewanella sp. ANA-3 chromosome 1, complete sequenceTRAG family protein1e-1478.2
NC_014910:2930860:2935496293549629375022007Alicycliphilus denitrificans BC chromosome, complete genometrag family protein1e-1478.2
NC_014910:242845:2432882432882452912004Alicycliphilus denitrificans BC chromosome, complete genometrag family protein1e-1478.2
NC_007643:955362:968844968844969686843Rhodospirillum rubrum ATCC 11170, complete genome2e-1477.4
NC_015556:2265940:2270422227042222724131992Pseudomonas fulva 12-X chromosome, complete genomeTRAG family protein4e-1477
NC_018691:3082000:3095819309581930978222004Alcanivorax dieselolei B5 chromosome, complete genomeTraG-like protein6e-1476.3
NC_007925:3933765:3946807394680739488011995Rhodopseudomonas palustris BisB18, complete genomeTRAG protein8e-1475.9
NC_010338:2443765:2450624245062424523451722Caulobacter sp. K31, complete genomeTRAG family protein1e-1375.5
NC_010125:2998619:3001295300129530033162022Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein traG1e-1374.7
NC_010170:4800000:4876733487673348787422010Bordetella petrii, complete genomeconjugal transfer protein TraG6e-1372.8
NC_014100:2782000:2795208279520827971601953Caulobacter segnis ATCC 21756 chromosome, complete genomeTRAG family protein8e-1372.4
NC_012982:711122:7139907139907159751986Hirschia baltica ATCC 49814, complete genomeTRAG family protein1e-1272
NC_014414:2540189:2553515255351525553531839Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein traG1e-1271.6
NC_011059:670345:6749096749096770952187Prosthecochloris aestuarii DSM 271, complete genome4e-1270.1
NC_015942:1947258:1965686196568619681812496Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein2e-0651.6
NC_015221:12389:3188831888337321845Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceTRAG family protein4e-0650.1
NC_013422:1755875:1779991177999117824622472Halothiobacillus neapolitanus c2, complete genomeTRAG family protein5e-0650.1