Pre_GI: BLASTP Hits

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Query: NC_004463:2262467:2293910 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2293910, End: 2294269, Length: 360

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1749000:176564817656481766007360Bradyrhizobium japonicum USDA 110, complete genomeputative transposase2e-55213
NC_004463:1898648:190692119069211907280360Bradyrhizobium japonicum USDA 110, complete genomeputative transposase6e-54208
NC_015376:3249773:325958332595833259891309Burkholderia gladioli BSR3 chromosome chromosome 2, completetransposase IS3/IS911 family protein7e-30129
NC_015381:1318818:133265013326501332958309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:1558263:156518715651871565495309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:1623587:165424416542441654552309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:1623587:167169416716941672002309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:1705383:171572717157271716035309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:252000:263041263041263349309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_015381:3457784:348758434875843487892309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-30129
NC_016589:2875000:288947028894702889775306Burkholderia sp. YI23 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-30129
NC_016626:1592781:160434616043461604651306Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase IS3/IS911 family protein5e-30129
NC_016626:1699500:173411117341111734419309Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase2e-29127
NC_016626:1669477:168503916850391685347309Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase2e-29127
NC_010515:1124298:113944911394491139757309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-29127
NC_009075:1638789:164361716436171643982366Burkholderia pseudomallei 668 chromosome II, complete sequencetransposase3e-27120
NC_004463:1683000:168405616840561684367312Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-26118
NC_013194:1631134:166117616611761661481306Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS3/IS911 family protein2e-26117
NC_020304:752012:771813771813772115303Desulfocapsa sulfexigens DSM 10523, complete genometransposase3e-26117
NC_020304:2677372:270497327049732705275303Desulfocapsa sulfexigens DSM 10523, complete genometransposase3e-26117
NC_007759:1028977:104255210425521042878327Syntrophus aciditrophicus SB, complete genometransposase2e-24110
NC_003063:304962:325209325209325517309Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-24110
NC_003305:1743939:174920517492051749549345Agrobacterium tumefaciens str. C58 chromosome linear, completeIS3 family transposase4e-24110
NC_012724:3100430:312102931210293121310282Burkholderia glumae BGR1 chromosome 1, complete genomeIS3 family transposase orfA4e-22103
NC_007298:1824335:183998618399861840288303Dechloromonas aromatica RCB, complete genomeTransposase IS3/IS9112e-2097.8
NC_007298:1759881:177896917789691779271303Dechloromonas aromatica RCB, complete genomeTransposase IS3/IS9112e-2097.8
NC_015848:2381148:240013624001362400432297Mycobacterium canettii CIPT 140010059, complete genometransposase, IS21 family protein4e-2096.7
NC_017162:270460:288231288231288548318Acinetobacter baumannii 1656-2 chromosome, complete genomeTransposase IS3/IS911 family protein1e-1995.1
NC_019940:866969:876956876956877246291Thioflavicoccus mobilis 8321 chromosome, complete genometransposase4e-1890.1
NC_014355:1865003:192454919245491924806258Candidatus Nitrospira defluvii, complete genomeputative transposase InsN for insertion sequence element IS9118e-1889
NC_009784:1231791:124725112472511247532282Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein8e-1785.5
NC_009783:1665610:167267016726701672951282Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein8e-1785.5
NC_003047:3360000:336272633627263362983258Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-1685.1
NC_019902:831911:844422844422844724303Thioalkalivibrio nitratireducens DSM 14787, complete genomeMobile element protein6e-1682.8
NC_009783:2306953:231827323182732318605333Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-1582
NC_020911:2921925:293183929318392932156318Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase8e-1475.9
NC_009455:53000:859258592586209285Dehalococcoides sp. BAV1 chromosome, complete genometransposase IS3/IS911 family protein2e-1374.7
NC_009455:273519:303835303835304119285Dehalococcoides sp. BAV1 chromosome, complete genometransposase IS3/IS911 family protein2e-1374.7
NC_020911:3410857:342413034241303424438309Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase1e-1272
NC_012724:1:867386738894222Burkholderia glumae BGR1 chromosome 1, complete genome3e-1270.5
NC_010125:1051735:106333910633391063650312Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase4e-1270.1
NC_020911:2921925:292192529219252922233309Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase5e-1269.7
NC_007626:1863747:187514518751451875438294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein6e-1269.3
NC_007626:1091000:111014511101451110438294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein6e-1269.3
NC_007626:3522265:352673935267393527032294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein6e-1269.3
NC_007626:2204767:221996922199692220262294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein6e-1269.3
NC_015732:2449900:245573724557372456039303Spirochaeta caldaria DSM 7334 chromosome, complete genometransposase IS3/IS911 family protein2e-1168.2
NC_013730:4440943:4448705444870544498351131Spirosoma linguale DSM 74, complete genome1e-1168.2
NC_007626:3522265:360548336054833605794312Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative1e-1168.2
NC_008209:3313087:332771433277143328010297Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-1167
NC_015259:2757081:276294027629402763233294Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase IS3/family protein6e-1166.2
NC_009485:1604942:162024416202441620534291Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase6e-1165.9
NC_015730:3693391:370642037064203706698279Roseobacter litoralis Och 149 chromosome, complete genomeputative transposase8e-1165.9
NC_007519:3326918:333469033346903334977288Desulfovibrio alaskensis G20 chromosome, complete genometransposase (class V)8e-1165.9
NC_020409:1589044:159421115942111594522312Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase1e-1065.5
NC_020409:584000:590254590254590565312Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase1e-1065.5
NC_010125:955863:998018998018998329312Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-1064.3
NC_010627:233572:245372245372245626255Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence4e-1063.5
NC_014844:2721746:274550027455002745784285Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein2e-0961.6
NC_014844:2721746:274282227428222743106285Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein2e-0961.6
NC_012918:3558500:356765735676573568007351Geobacter sp. M21 chromosome, complete genometransposase IS3/IS911 family protein2e-0961.6
NC_015976:3118804:313529831352983135594297Sphingobium sp. SYK-6, complete genomeputative transposase for insertion sequence element1e-0961.6
NC_009337:1448607:146170514617051461992288Chlorobium phaeovibrioides DSM 265 chromosome, complete genometransposase IS3/IS911 family protein1e-0961.6
NC_010814:4099:204832048320788306Geobacter lovleyi SZ, complete genometransposase IS3/IS911 family protein2e-0960.8
NC_011758:247666:263326263326263610285Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completetransposase IS3/IS911 family protein3e-0960.8
NC_014972:137184:151042151042151251210Desulfobulbus propionicus DSM 2032 chromosome, complete genometransposase IS3/IS911 family protein3e-0960.5
NC_007626:3522265:355813135581313558514384Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-0960.1
NC_020911:2998000:300845030084503008758309Octadecabacter antarcticus 307, complete genomeIS3-family mobile element-associated protein5e-0959.7
NC_014314:238043:267595267595267879285Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completetransposase IS3/IS911 family protein6e-0959.7
NC_008740:257434:279940279940280224285Marinobacter aquaeolei VT8, complete genometransposase IS3/IS911 family protein1e-0858.9
NC_013222:615948:623246623246623521276Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-0857.8
NC_020911:2998000:303949830394983039806309Octadecabacter antarcticus 307, complete genomeIS3-family mobile element-associated protein3e-0857.4
NC_011059:65414:809328093281225294Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:442380:470687470687470965279Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein5e-0856.6
NC_014364:2246524:225513322551332255468336Spirochaeta smaragdinae DSM 11293 chromosome, complete genometransposase IS3/IS911 family protein1e-0755.5
NC_003047:3360000:341622334162233416993771Sinorhizobium meliloti 1021, complete genome1e-0755.5
NC_014364:394899:453745453745454077333Spirochaeta smaragdinae DSM 11293 chromosome, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_014655:1098428:110605511060551106366312Leadbetterella byssophila DSM 17132 chromosome, complete genometransposase is3/is911 family protein2e-0754.7
NC_011059:2478075:249733324973332497623291Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein2e-0754.3
NC_011059:2272747:228790222879022288192291Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_011060:1947795:196951919695191969812294Pelodictyon phaeoclathratiforme BU-1, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_010831:931961:943215943215943505291Chlorobium phaeobacteroides BS1, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_008435:1215437:130166113016611301900240Rhodopseudomonas palustris BisA53, complete genomehypothetical protein4e-0753.5
NC_014355:2775979:277996527799652780219255Candidatus Nitrospira defluvii, complete genomeputative transposase (fragment)7e-0752.8
NC_011898:426951:4627794627794639281150Clostridium cellulolyticum H10, complete genometransposase IS3/IS911 family protein8e-0752.4
NC_014819:25765:422584225842542285Asticcacaulis excentricus CB 48 plasmid pASTEX02, completetransposase IS3/IS911 family protein1e-0652
NC_008048:389645:424080424080424355276Sphingopyxis alaskensis RB2256, complete genometransposase IS3/IS9112e-0650.8
NC_010803:2067539:209753620975362097829294Chlorobium limicola DSM 245, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_010803:1009000:102795710279571028250294Chlorobium limicola DSM 245, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_005090:1033746:1038688103868810398781191Wolinella succinogenes DSM 1740, complete genomePUTATIVE TRANSPOSASE6e-0649.7
NC_016112:3103716:310947131094713109755285Methylomicrobium alcaliphilum chromosome, complete genometransposase7e-0649.3
NC_008571:938835:988688988688988963276Gramella forsetii KT0803, complete genomeIS3/IS911 family transposase1e-0548.9