Pre_GI: BLASTP Hits

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Query: NC_004349:3938:16075 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Start: 16075, End: 16365, Length: 291

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:3055358:306991830699183070208291Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-24109
NC_011662:2402408:242554624255462425836291Thauera sp. MZ1T, complete genomeDNA polymerase beta domain protein region4e-24109
NC_008786:1553833:156668015666801566970291Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase, beta domain protein region1e-23108
NC_019902:3397170:341912934191293419419291Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA polymerase beta domain-containing protein3e-22103
NC_007950:109399:118275118275118571297Polaromonas sp. JS666 plasmid 2, complete sequenceDNA polymerase, beta-like region4e-1683.6
NC_019902:1:146151461514905291Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative nucleotidyltransferase1e-1375.1
NC_015388:2143329:214871221487122149002291Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeDNA polymerase beta domain protein region2e-1374.3
NC_013889:1159343:117613411761341176424291Thioalkalivibrio sp. K90mix chromosome, complete genomeDNA polymerase beta domain protein region1e-1168.6
NC_009921:6691089:671910567191056719386282Frankia sp. EAN1pec, complete genomeDNA polymerase beta domain protein region2e-0754.3