Pre_GI: BLASTP Hits

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Query: NC_004347:718091:731746 Shewanella oneidensis MR-1, complete genome

Start: 731746, End: 732972, Length: 1227

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015723:1347946:1351725135172513529541230Cupriavidus necator N-1 chromosome 2, complete sequenceoxidoreductase molybdopterin binding protein SorA2e-41170
NC_010505:5583000:5583260558326055843451086Methylobacterium radiotolerans JCM 2831, complete genomeSulfite oxidase3e-39162
NC_010505:5583000:5597689559768955987681080Methylobacterium radiotolerans JCM 2831, complete genomeSulfite oxidase8e-38158
NC_014221:1167261:1171197117119711724411245Truepera radiovictrix DSM 17093 chromosome, complete genomeoxidoreductase molybdopterin binding protein3e-37156
NC_015594:1210736:1228268122826812294731206Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeSulfite oxidase3e-35149
NC_011758:369704:1867186730781212Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase molybdopterin binding2e-34146
NC_009720:251703:2607632607632619801218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding1e-32140
NC_009720:2945655:2961561296156129627781218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding1e-32140
NC_010505:5583000:5585943558594355871661224Methylobacterium radiotolerans JCM 2831, complete genomeoxidoreductase molybdopterin binding1e-31137
NC_012988:731790:7317907317907329951206Methylobacterium extorquens DM4, complete genomesulfite:cytochrome C oxidoreductase subunit A2e-31137
NC_014217:3431878:3431878343187834330951218Starkeya novella DSM 506 chromosome, complete genomeoxidoreductase molybdopterin binding protein2e-31136
NC_012660:2045398:2068951206895120701621212Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C dehydrogenase-like protein1e-30134
NC_011892:77975:1085571085571097681212Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeoxidoreductase molybdopterin binding8e-28125
NC_009142:1282589:1285306128530612864091104Saccharopolyspora erythraea NRRL 2338, complete genomenitrate reductase (NADH)1e-27124
NC_008786:1767315:1783938178393817851671230Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase, molybdopterin binding3e-26119
NC_003295:856775:8575088575088586471140Ralstonia solanacearum GMI1000, complete genomePROBABLE SULFITE:CYTOCHROME C OXIDOREDUCTASE (SUBUNIT A) OXIDOREDUCTASE PROTEIN1e-25117
NC_011757:4445343:4445343444534344465661224Methylobacterium chloromethanicum CM4, complete genomeoxidoreductase molybdopterin binding2e-25117
NC_008060:1346581:1365391136539113666471257Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceoxidoreductase, molybdopterin binding2e-22107
NC_015376:2010009:2027303202730320286101308Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative oxidoreductase6e-22105
NC_012988:731790:7333797333797347221344Methylobacterium extorquens DM4, complete genomesulfite oxidase3e-21103
NC_002977:1600350:1602141160214116034001260Methylococcus capsulatus str. Bath, complete genomesulfite oxidase SoxC, putative6e-21102
NC_009850:566755:5702465702465715801335Arcobacter butzleri RM4018, complete genomesulfur oxidation protein SoxCD, sulfur dehydrogenase subunit6e-1892
NC_017192:683493:6908406908406921741335Arcobacter sp. L, complete genomesulfur oxidation protein SoxC1e-1791.3
NC_014212:3091571:3112047311204731134441398Meiothermus silvanus DSM 9946 chromosome, complete genomeoxidoreductase molybdopterin binding protein4e-1789.4
NC_013595:1851226:1854516185451618561561641Streptosporangium roseum DSM 43021, complete genomeSulfite oxidase-like protein2e-1687
NC_014166:1809052:1818598181859818199201323Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeoxidoreductase molybdopterin binding protein2e-1687
NC_014307:1855356:188314518831451884143999Ralstonia solanacearum CFBP2957 chromosome, complete genomeoxidoreductase molybdopterin binding3e-1686.3
NC_009485:1946000:1959792195979219610751284Bradyrhizobium sp. BTAi1 chromosome, complete genometwin-arginine translocation pathway signal7e-1582
NC_015976:2900891:290628329062832906639357Sphingobium sp. SYK-6, complete genomeputative oxidoreductase9e-0961.6