Pre_GI: BLASTP Hits

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Query: NC_004347:4211241:4233397 Shewanella oneidensis MR-1, complete genome

Start: 4233397, End: 4233930, Length: 534

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:483253:502584502584503132549Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-31134
NC_017168:1729922:174908417490841749632549Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-31134
NC_017154:3997810:401697240169724017520549Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-31134
NC_014029:4057696:407685840768584077406549Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-31134
NC_009381:321577:340740340740341288549Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-31134
NC_003143:4105754:412491641249164125464549Yersinia pestis CO92, complete genomehypothetical protein4e-31134
NC_008150:4140804:415995641599564160504549Yersinia pestis Antiqua, complete genomehypothetical protein4e-31134
NC_009655:866281:868881868881869426546Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein2e-23108
NC_017505:841496:863533863533864045513Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein3e-22104
NC_017512:760000:780982780982781557576Neisseria meningitidis WUE 2594, complete genomehypothetical protein3e-22104
NC_010120:788000:809748809748810266519Neisseria meningitidis 053442, complete genomeconserved hypothetical protein8e-22102
NC_007973:2773427:279645927964592797067609Ralstonia metallidurans CH34 chromosome 1, complete sequenceprotein of unknown function DUF6153e-21100
NC_015276:1947936:196596219659621966495534Marinomonas mediterranea MMB-1 chromosome, complete genomeUncharacterized protein family UPF03076e-21100
NC_017517:867595:889554889554890060507Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein7e-21100
NC_014910:1200605:120238812023881203056669Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein1e-1479.3