Pre_GI: BLASTP Hits

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Query: NC_004347:4211241:4229648 Shewanella oneidensis MR-1, complete genome

Start: 4229648, End: 4231774, Length: 2127

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007404:2743877:2766620276662027689382319Thiobacillus denitrificans ATCC 25259, complete genomeTonB-dependent receptor protein3e-103376
NC_007484:580106:5801065801065822622157Nitrosococcus oceani ATCC 19707, complete genomeTonB-dependent receptor4e-42173
NC_014315:2711852:2729176272917627313322157Nitrosococcus watsoni C-113 chromosome, complete genomeTonB-dependent receptor3e-41170
NC_013166:1841446:1843284184328418453712088Kangiella koreensis DSM 16069, complete genomeTonB-dependent receptor2e-35151
NC_003910:486776:4867764867764890252250Colwellia psychrerythraea 34H, complete genomeTonB-dependent receptor6e-32139
NC_011059:1391734:1398678139867814007742097Prosthecochloris aestuarii DSM 271, complete genomeTonB-dependent receptor3e-1997.4
NC_012438:565419:5683905683905704922103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeouter membrane protein C1e-1792.4
NC_008576:4467745:4471636447163644737232088Magnetococcus sp. MC-1, complete genomeTonB-dependent copper receptor3e-1790.9
NC_010506:537833:5598925598925618801989Shewanella woodyi ATCC 51908, complete genomeTonB-dependent copper receptor5e-1790.1
NC_011026:2624775:2642802264280226449402139Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug3e-1377.8
NC_018691:3437821:3439688343968834417662079Alcanivorax dieselolei B5 chromosome, complete genomePutative copper transport outer membrane porin OprC1e-1275.5
NC_012214:1974500:2010242201024220123052064Erwinia pyrifoliae Ep1/96, complete genomeTonB dependent receptor2e-0861.6
NC_010410:3719599:3736103373610337382172115Acinetobacter baumannii AYE, complete genomeputative outer membrane copper receptor (OprC)3e-0860.8
NC_009831:5107924:5110336511033651123392004Shewanella sediminis HAW-EB3, complete genomeTonB-dependent copper receptor3e-0860.8
NC_010611:208268:2117642117642138782115Acinetobacter baumannii ACICU, complete genomeOuter membrane receptor protein, mostly Fe transport4e-0757.4