Pre_GI: BLASTP Hits

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Query: NC_004347:4211241:4213932 Shewanella oneidensis MR-1, complete genome

Start: 4213932, End: 4214876, Length: 945

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:593359:611775611775612722948Shewanella baltica OS185 chromosome, complete genomepolysulfide reductase NrfD1e-131469
NC_013421:2972269:298765029876502988612963Pectobacterium wasabiae WPP163, complete genomecytochrome c nitrite reductase, NrfD subunit2e-35150
NC_012917:2786283:278628327862832787245963Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecytochrome c nitrite reductase, NrfD subunit2e-34146
NC_008570:3083850:309838830983883099341954Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein NrfD2e-32139
NC_011566:4309151:431839943183994319340942Shewanella piezotolerans WP3, complete genomePolysulphide reductase, NrfD6e-27121