Pre_GI: BLASTP Hits

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Query: NC_004347:3303957:3317181 Shewanella oneidensis MR-1, complete genome

Start: 3317181, End: 3318434, Length: 1254

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:2025127:2036955203695520381301176Escherichia coli B str. REL606 chromosome, complete genomeO antigen polymerase (Wzy)7e-1479
NC_012947:1720732:1735877173587717370521176Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-1479
NC_011750:1034919:1049974104997410511491176Escherichia coli IAI39 chromosome, complete genomeO-antigen polymerase Wzy7e-1479
NC_006138:23902:3718537185383481164Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0757.8