Pre_GI: BLASTP Hits

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Query: NC_004347:3303957:3316184 Shewanella oneidensis MR-1, complete genome

Start: 3316184, End: 3317161, Length: 978

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015388:269301:290712290712291707996Desulfobacca acetoxidans DSM 11109 chromosome, complete genomepolysaccharide deacetylase5e-78291
NC_019904:3072241:309107230910723092064993Echinicola vietnamensis DSM 17526 chromosome, complete genomexylanase/chitin deacetylase4e-54211
NC_014355:2635500:2639070263907026400771008Candidatus Nitrospira defluvii, complete genomehypothetical protein8e-1891.3