Pre_GI: BLASTP Hits

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Query: NC_004347:2668000:2685007 Shewanella oneidensis MR-1, complete genome

Start: 2685007, End: 2685843, Length: 837

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020304:1097478:111751111175111118353843Desulfocapsa sulfexigens DSM 10523, complete genomeputative periplasmic or secreted lipoprotein4e-2098.6
NC_012997:4026000:403367340336734034401729Teredinibacter turnerae T7901, complete genomehistidine kinase3e-1065.9
NC_007645:3434795:343923134392313439551321Hahella chejuensis KCTC 2396, complete genomepredicted periplasmic or secreted lipoprotein1e-0964.3
NC_016609:2730449:274687327468732747538666Niastella koreensis GR20-10 chromosome, complete genometransport-associated protein2e-0962.8
NC_010694:715500:734999734999735613615Erwinia tasmaniensis, complete genomeOsmotically inducible protein Y9e-0960.8
NC_012214:745302:764148764148764762615Erwinia pyrifoliae Ep1/96, complete genomeOsmotically inducible protein Y7e-0857.8
NC_013971:666730:687840687840688454615Erwinia amylovora ATCC 49946 chromosome, complete genomeosmotically inducible protein Y2e-0756.6
NC_003295:199354:210491210491211138648Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-0755.5
NC_009485:8138314:815280381528038153456654Bradyrhizobium sp. BTAi1 chromosome, complete genomeosmotically inducible sensory protein2e-0653.5
NC_015740:1017000:103717210371721037750579Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative lipoprotein2e-0653.1
NC_012560:1260031:127393912739391274424486Azotobacter vinelandii DJ, complete genomehypothetical protein3e-0652.8
NC_021150:1258780:127395112739511274436486Azotobacter vinelandii CA6, complete genomehypothetical protein3e-0652.8
NC_007412:147757:167919167919168590672Anabaena variabilis ATCC 29413 plasmid C, complete sequenceTransport-associated7e-0651.6
NC_013716:5141269:516100051610005161617618Citrobacter rodentium ICC168, complete genomeosmotically-inducible protein Y7e-0651.6
NC_008321:3189974:319476931947693195317549Shewanella sp. MR-4, complete genometransport-associated8e-0651.2