Pre_GI: BLASTP Hits

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Query: NC_004347:2668000:2668304 Shewanella oneidensis MR-1, complete genome

Start: 2668304, End: 2669416, Length: 1113

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017059:2084500:2086479208647920877051227Rhodospirillum photometricum DSM 122, complete genomeResponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-1582.8
NC_014393:3055610:3073477307347730746821206Clostridium cellulovorans 743B chromosome, complete genomemetal dependent phosphohydrolase6e-1478.6
NC_014721:508000:5241685241685253551188Caldicellulosiruptor kristjanssonii 177R1B chromosome, completesignal transduction protein3e-1169.7
NC_007626:1091000:1108294110829411093281035Magnetospirillum magneticum AMB-1, complete genomeCheY-like receiver2e-1066.6
NC_009437:1481064:1497104149710414982881185Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeresponse regulator receiver protein6e-1065.5
NC_014152:2181360:218136021813602182199840Thermincola sp. JR, complete genomemetal dependent phosphohydrolase4e-0755.8
NC_007508:4067862:4090484409048440915991116Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative two-component system response regulator5e-0755.8
NC_009656:2663387:2665000266500026663431344Pseudomonas aeruginosa PA7 chromosome, complete genomeresponse regulator3e-0653.1
NC_012108:3878500:390108139010813901929849Desulfobacterium autotrophicum HRM2, complete genomeputative chemotaxis signal transduction protein5e-0652.4