Pre_GI: BLASTP Hits

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Query: NC_004307:2208591:2213903 Bifidobacterium longum NCC2705, complete genome

Start: 2213903, End: 2214553, Length: 651

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010816:2326453:233169023316902332340651Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease S subunit9e-125445
NC_015052:1771976:1781878178187817830351158Bifidobacterium longum subsp. infantis 157F, complete genomerestriction-modification system specificity subunit2e-90332
NC_016610:2077603:2097765209776520989701206Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein3e-28124
NC_009053:313779:3204273204273215211095Actinobacillus pleuropneumoniae L20, complete genomeputative Type I restriction enzyme EcoR124II specificity protein8e-28123
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein1e-0963.2
NC_016023:1923170:1932204193220419333851182Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity subunit4e-0961.6
NC_015052:1771976:178810617881061788549444Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein9e-0753.5