Pre_GI: BLASTP Hits

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Query: NC_004129:5846415:5878020 Pseudomonas fluorescens Pf-5, complete genome

Start: 5878020, End: 5879363, Length: 1344

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:3413461:3418278341827834195791302Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-165582
NC_009656:475465:4919204919204932661347Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-100366
NC_009434:695582:6973666973666987301365Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-78292
NC_017506:1:8596859699781383Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-74279
NC_016622:527688:5262945262945276911398Azospirillum lipoferum 4B, complete genomehypothetical protein4e-70265
NC_008313:886248:9121509121509135141365Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein3e-69263
NC_013856:692000:6988056988057001661362Azospirillum sp. B510 plasmid pAB510b, complete sequencehypothetical protein7e-68258
NC_008027:2648560:2667609266760926689461338Pseudomonas entomophila L48, complete genomehypothetical protein3e-66252
NC_007517:2515870:2541911254191125432451335Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF13299e-64244
NC_015563:1951368:1976027197602719773881362Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein9e-64244
NC_010512:951527:9641769641769655371362Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceprotein of unknown function DUF13299e-63241
NC_020829:4429435:4434495443449544358471353Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-58227
NC_007509:309348:3110713110713126361566Burkholderia sp. 383 chromosome 3, complete sequenceprotein of unknown function DUF13291e-54214
NC_011770:3396637:3404136340413634055601425Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-54214
NC_014323:3976351:4035416403541640367771362Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-52206