Pre_GI: BLASTP Hits

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Query: NC_004129:5781413:5796944 Pseudomonas fluorescens Pf-5, complete genome

Start: 5796944, End: 5797432, Length: 489

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007511:3512100:351553335155333516039507Burkholderia sp. 383 chromosome 2, complete sequenceDisulphide bond formation protein DsbB4e-2097.4
NC_015222:2683056:268305626830562683574519Nitrosomonas sp. AL212 chromosome, complete genomedisulfide bond formation protein DsbB5e-0857
NC_015731:3077842:308105130810513081524474Nitrosomonas sp. Is79A3 chromosome, complete genomeDisulfide bond formation protein B2e-0652