Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:5204500:5220473 Pseudomonas fluorescens Pf-5, complete genome

Start: 5220473, End: 5221483, Length: 1011

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009348:1475955:1534685153468515357101026Aeromonas salmonicida subsp. salmonicida A449, complete genomesuccinylglutamate desuccinylase3e-59229
NC_020064:2779864:279407427940742795057984Serratia marcescens FGI94, complete genomesuccinylglutamate desuccinylase7e-54211
NC_020181:1057476:105747610574761058471996Enterobacter aerogenes EA1509E, complete genomeSuccinylglutamate desuccinylase4e-48192
NC_015663:4347187:436466743646674365662996Enterobacter aerogenes KCTC 2190 chromosome, complete genomesuccinylglutamate desuccinylase4e-48192