Pre_GI: BLASTP Hits

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Query: NC_004129:2440744:2461354 Pseudomonas fluorescens Pf-5, complete genome

Start: 2461354, End: 2462517, Length: 1164

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:2108897:2107684210768421089671284Halomonas elongata DSM 2581, complete genomehypothetical protein1e-124446
NC_010511:3233884:3255358325535832565661209Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein1e-58227
NC_009952:442029:4510454510454522021158Dinoroseobacter shibae DFL 12, complete genomedomain of unknown function DUF17454e-56218
NC_014507:906960:9253989253989265071110Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein4e-41169
NC_009617:3184924:3220290322029032213901101Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein8e-1788.2
NC_015636:832224:8363138363138375421230Methanothermococcus okinawensis IH1 chromosome, complete genomehypothetical protein8e-1685.1
NC_015949:2327500:232963523296352330597963Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome4e-1376.3
NC_008609:2787274:2808532280853228105592028Pelobacter propionicus DSM 2379, complete genomemethyl-accepting chemotaxis sensory transducer6e-1065.5
NC_016816:2684336:2715536271553627175902055Pantoea ananatis LMG 5342, complete genomemethyl-accepting chemotaxis sensory transducer3e-0963.5
NC_009778:567000:5693295693295711611833Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0963.2
NC_020260:603796:6061386061386079461809Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-0963.2
NC_013956:1810026:1824172182417218262262055Pantoea ananatis LMG 20103 chromosome, complete genomeTsr9e-0961.6