Pre_GI: BLASTP Hits

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Query: NC_004129:2328491:2343447 Pseudomonas fluorescens Pf-5, complete genome

Start: 2343447, End: 2344091, Length: 645

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:2499432:254302525430252543819795Pseudomonas aeruginosa LESB58, complete genomeNlpC/P60 family protein5e-21100
NC_015566:3622385:363725136372513638000750Serratia sp. AS12 chromosome, complete genomephage minor tail protein L6e-21100
NC_009436:2395913:241456624145662415276711Enterobacter sp. 638, complete genomeNLP/P60 protein7e-21100
NC_007434:1809946:181133118113311812014684Burkholderia pseudomallei 1710b chromosome I, complete sequencephage minor tail protein L9e-21100
NC_015566:3622385:363654736365473637248702Serratia sp. AS12 chromosome, complete genomeNLP/P60 protein1e-2099.8
NC_020418:2868000:289198028919802892681702Morganella morganii subsp. morganii KT, complete genomePhage tail assembly protein3e-2098.2
NC_020418:2084937:210392221039222104623702Morganella morganii subsp. morganii KT, complete genomePhage tail assembly protein3e-2098.2
NC_020063:2531643:255410125541012554805705Enterobacteriaceae bacterium strain FGI 57, complete genomeputative metal-dependent protease of the PAD1/JAB1 superfamily6e-2097.4
NC_013856:595496:612184612184612927744Azospirillum sp. B510 plasmid pAB510b, complete sequencehypothetical protein1e-1996.7
NC_016816:2925459:294568829456882946407720Pantoea ananatis LMG 5342, complete genomephage tail assembly protein3e-1995.1
NC_013892:3803278:380768038076803808381702Xenorhabdus bovienii SS-2004 chromosome, complete genomephage minor tail protein1e-1893.2
NC_007434:1809946:181206418120641812816753Burkholderia pseudomallei 1710b chromosome I, complete sequencegp181e-1789.4
NC_015062:58826:778687786878599732Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceNLP/P60 protein2e-1789.4
NC_016816:2925459:294641029464102947147738Pantoea ananatis LMG 5342, complete genomeminor tail protein L3e-1788.6
NC_014838:254322:254710254710255447738Pantoea sp. At-9b plasmid pPAT9B01, complete sequencephage minor tail protein L3e-1788.6
NC_013282:1842412:184241218424121843116705Cronobacter turicensis, complete genomehypothetical protein4e-1788.2
NC_014838:254322:255450255450256169720Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceNLP/P60 protein1e-1686.7
NC_020260:1293860:129315912931591293863705Cronobacter sakazakii Sp291, complete genomephage minor tail protein1e-1686.3
NC_017047:1934430:193371819337181934437720Rahnella aquatilis HX2 chromosome, complete genomeNLP/P60 protein6e-1684.3
NC_011283:3379181:339476633947663395473708Klebsiella pneumoniae 342 chromosome, complete genomephage tail assembly protein5e-1684.3
NC_013892:671000:673335673335674039705Xenorhabdus bovienii SS-2004 chromosome, complete genomephage minor tail protein7e-1684
NC_020418:2868000:289268428926842893442759Morganella morganii subsp. morganii KT, complete genomePhage minor tail protein8e-1684
NC_020418:2084937:210316121031612103919759Morganella morganii subsp. morganii KT, complete genomePhage minor tail protein8e-1684
NC_011283:3379181:339547633954763396225750Klebsiella pneumoniae 342 chromosome, complete genomephage minor tail protein L9e-1683.6
NC_007712:172000:176335176335177072738Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-1581.6
NC_007712:3806000:381219138121913812928738Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-1581.6
NC_016612:4119410:413118541311854131937753Klebsiella oxytoca KCTC 1686 chromosome, complete genomegp181e-1479.7
NC_009436:2395913:241527824152782416033756Enterobacter sp. 638, complete genomephage minor tail protein L2e-1479.3
NC_011745:1055354:106613410661341066832699Escherichia coli ED1a chromosome, complete genomeminor tail protein L3e-1478.6
NC_011353:1195179:120534812053481206046699Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein L4e-1478.2
NC_002695:2158314:216810421681042168802699Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein4e-1478.2
NC_011751:1377457:138660313866031387301699Escherichia coli UMN026 chromosome, complete genomeMinor tail protein L5e-1477.8
NC_002655:1909139:191957819195781920276699Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933O5e-1477.8
NC_007434:1712000:172330217233021724042741Burkholderia pseudomallei 1710b chromosome I, complete sequencegp195e-1477.8
NC_013364:2522888:254487625448762545574699Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein7e-1477.4
NC_013364:3312379:332479333247933325491699Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein7e-1477.4
AP010958:2272919:229472422947242295422699Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein6e-1477.4
NC_013353:2272919:229472422947242295422699Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein6e-1477.4
NC_013361:2169948:217981321798132180511699Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein6e-1477.4
NC_013941:2425233:244830624483062449004699Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-1477.4
NC_013361:1896446:190708519070851907783699Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein6e-1477.4
NC_004431:1352906:136211513621151362813699Escherichia coli CFT073, complete genomePutative tail component of prophage8e-1477
NC_011750:1931384:194214619421461942844699Escherichia coli IAI39 chromosome, complete genomeminor tail protein L8e-1477
NC_013361:1593543:160132516013251602023699Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein8e-1477
NC_013361:3597812:362173736217373622435699Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein8e-1477
NC_011353:1761977:177193117719311772629699Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein L8e-1477
NC_013008:1761165:177090717709071771605699Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component L8e-1477
NC_002695:2893951:290412529041252904823699Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein7e-1477
NC_011353:2892265:289962428996242900322699Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein L7e-1477
NC_013008:2889743:289991828999182900616699Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component L of prophage CP-933U7e-1477
NC_013364:1997891:201948820194882020186699Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein7e-1477
NC_002695:1571389:157569815756981576396699Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein1e-1376.6
NC_002655:1655944:165967316596731660371699Escherichia coli O157:H7 EDL933, complete genomeputative tail component L homolog encoded by prophage CP-933N1e-1376.6
NC_011353:1513000:151662615166261517324699Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein L1e-1376.6
NC_013008:1513000:151691415169141517612699Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeminor tail protein1e-1376.6
NC_002655:2730659:275341427534142754112699Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component L of prophage CP-933U2e-1376.3
NC_011742:585908:595119595119595817699Escherichia coli S88 chromosome, complete genomeMinor tail protein L2e-1375.5
NC_011745:2025725:203577620357762036474699Escherichia coli ED1a chromosome, complete genomeminor tail protein L4e-1375.1
NC_011750:919953:926263926263926961699Escherichia coli IAI39 chromosome, complete genomeminor tail protein L1e-1273.2
NC_004431:1352906:136286413628641363562699Escherichia coli CFT073, complete genomePutative tail fiber component K of prophage2e-1272.4
NC_011274:1299475:129947512994751300206732Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage minor tail protein2e-1272.4
NC_013892:2005480:202358820235882024337750Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1272
NC_013892:671000:674042674042674791750Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1272
NC_013892:3803278:380881838088183809558741Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1272
NC_011745:1055354:1066582106658210675861005Escherichia coli ED1a chromosome, complete genometail fiber component K8e-1270.5
NC_011745:2025725:2035022203502220360261005Escherichia coli ED1a chromosome, complete genometail fiber component K9e-1270.5
NC_013364:1997891:201873920187392019482744Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein1e-1170.1
NC_011751:1377457:138731213873121388055744Escherichia coli UMN026 chromosome, complete genometail fiber component K1e-1169.7
NC_011742:585908:5955675955675965711005Escherichia coli S88 chromosome, complete genometail fiber component K2e-1169.3
NC_011750:919953:926972926972927715744Escherichia coli IAI39 chromosome, complete genometail fiber component K2e-1169.3
NC_011750:1931384:194139719413971942140744Escherichia coli IAI39 chromosome, complete genometail assembly protein K2e-1169.3
NC_013361:3597812:362098336209833621726744Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein3e-1168.6
NC_013941:1963523:197325419732541974072819Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber component K of prophage3e-1168.6
NC_013364:3312379:332404433240443324787744Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein3e-1168.6
NC_013364:2522888:254412725441272544870744Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein3e-1168.6
NC_011742:4962008:498799849879984988783786Escherichia coli S88 chromosome, complete genometail fiber component K of prophage6e-1167.8
NC_015062:58826:7860278602802601659Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencephage minor tail protein L6e-1167.8
AP010958:2134556:215194721519472152690744Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein6e-1167.8
NC_013353:2134556:215194721519472152690744Escherichia coli O103:H2 str. 12009, complete genometail assembly protein6e-1167.8
NC_011601:756885:760476760476761219744Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometail assembly protein5e-1167.8
AP010958:1305712:130507113050711305814744Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein5e-1167.8
NC_013353:1305712:130507113050711305814744Escherichia coli O103:H2 str. 12009, complete genometail assembly protein5e-1167.8
NC_008563:5011997:503803050380305038773744Escherichia coli APEC O1, complete genomeputative tail fiber component K of prophage6e-1167.4
AP010958:867869:867228867228867971744Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein1e-1067
NC_013353:867869:867228867228867971744Escherichia coli O103:H2 str. 12009, complete genometail assembly protein1e-1067
AP010958:2272919:229397522939752294718744Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein1e-1067
NC_013353:2272919:229397522939752294718744Escherichia coli O103:H2 str. 12009, complete genometail assembly protein1e-1067
NC_011294:1220526:123909112390911239351261Salmonella enterica subsp. enterica serovar Enteritidis str8e-1167
AP010958:1472506:148151014815101482253744Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein8e-1167
NC_013353:1472506:148151014815101482253744Escherichia coli O103:H2 str. 12009, complete genometail assembly protein8e-1167
NC_013361:1896446:190778919077891908532744Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein1e-1066.6
NC_011601:1077548:107690710769071077650744Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometail assembly protein1e-1066.6
NC_016810:2719779:273908927390892739826738Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-1066.2
NC_011080:2722492:274143427414342742171738Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-1066.2
NC_016856:2773995:279293127929312793668738Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stail assembly protein K-like protein2e-1066.2
NC_011294:1220526:123838612383861239081696Salmonella enterica subsp. enterica serovar Enteritidis strphage minor tail protein2e-1066.2
NC_013941:5317424:534299153429915343689699Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1065.9
NC_002655:1655944:166209616620961662833738Escherichia coli O157:H7 EDL933, complete genomeputative tail component K homolog encoded by prophage CP-933N3e-1065.5
NC_002695:1571389:157812215781221578859738Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein3e-1065.5
NC_011353:1513000:151905015190501519787738Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail assembly protein3e-1065.5
NC_013008:1513000:151933815193381520075738Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component K-like protein3e-1065.5
NC_013361:1593543:160203416020341602777744Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein3e-1065.5
NC_002655:1909139:192014919201491921030882Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933O3e-1065.5
NC_013008:2889743:289916428991642900045882Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component K of prophage CP-933U2e-1065.5
NC_002655:2730659:275266027526602753541882Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component K of prophage CP-933U2e-1065.5
NC_002695:2893951:290337129033712904114744Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein2e-1065.5
NC_013364:863209:874692874692875435744Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein2e-1065.5
NC_013361:2169948:217905921790592179802744Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein2e-1065.5
NC_011751:680417:679776679776680519744Escherichia coli UMN026 chromosome, complete genomeputative tail fiber component K of prophage7e-1063.9
NC_016863:2721826:274188027418802742578699Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail component L-like protein8e-1063.9
NC_013008:918215:922323922323923066744Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K9e-1063.5
NC_013008:918215:921619921619922317699Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K1e-0963.5
NC_013941:1014386:101369110136911014389699Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeminor tail protein1e-0963.2
NC_013353:1472506:148080114808011481499699Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein2e-0962.8
AP010958:1472506:148080114808011481499699Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein2e-0962.8
NC_013941:1963523:197400219740021974700699Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeminor tail protein2e-0962.8
NC_011750:527470:551439551439552137699Escherichia coli IAI39 chromosome, complete genomeminor tail protein L2e-0962.8
NC_013941:5317424:534364053436405344437798Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber component K of prophage2e-0962.8
NC_013941:2425233:244756024475602448300741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecell wall-associated hydrolases (invasion-associated proteins)2e-0962.8
NC_011742:4962008:498733749873374988035699Escherichia coli S88 chromosome, complete genomeMinor tail protein L2e-0962.4
NC_008563:5011997:503732750373275038025699Escherichia coli APEC O1, complete genomeputative minor tail protein2e-0962.4
NC_013941:1014386:101438610143861015138753Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber component K of prophage3e-0962
NC_011601:756885:759772759772760470699Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeminor tail protein1e-0860.1
NC_011094:638552:642455642455643159705Salmonella enterica subsp. enterica serovar Schwarzengrund strphage minor tail protein L1e-0859.7
NC_013941:338121:337480337480338223744Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail assembly protein2e-0859.3
NC_008563:2041345:205865620586562059399744Escherichia coli APEC O1, complete genometail assembly protein2e-0859.3
NC_002655:919654:919082919082919756675Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933K4e-0858.2
NC_020063:2531643:255480725548072555562756Enterobacteriaceae bacterium strain FGI 57, complete genomelambda-like phage minor tail protein L3e-0755.5
NC_013364:863209:874289874289874681393Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein6e-0754.3
NC_013508:2587913:260660826066082607303696Edwardsiella tarda EIB202, complete genomephage tail component L-like protein5e-0754.3
NC_002695:2158314:216786321678632168093231Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0653.1
NC_011353:2892265:289887028988702899505636Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail assembly protein2e-0652.4
NC_011353:1761977:177274817727481773383636Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail assembly protein2e-0652.4
NC_013008:1761165:177172417717241772359636Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0652.4
NC_011353:1195179:120616512061651206800636Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail assembly protein2e-0652.4
NC_011353:1716037:171540517154051716040636Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-0652.4
NC_011353:2563056:258491225849122585547636Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail assembly protein2e-0652.4
NC_013008:2561586:258389225838922584527636Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component2e-0652.4
NC_013856:595496:612998612998613678681Azospirillum sp. B510 plasmid pAB510b, complete sequencehypothetical protein3e-0652
NC_013364:1477248:147671514767151477350636Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein7e-0650.8