Pre_GI: BLASTP Hits

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Query: NC_004129:2234851:2255846 Pseudomonas fluorescens Pf-5, complete genome

Start: 2255846, End: 2256547, Length: 702

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1822751:185362018536201854276657Ralstonia solanacearum PSI07 megaplasmid, complete sequencesannc-like protein2e-26119
NC_015138:4103457:411774141177414118400660Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeprolyl 4-hydroxylase subunit alpha1e-22106
NC_008752:4086283:410357441035744104233660Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSanC, putative2e-22105
NC_007274:72979:919099190992565657Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completeSanC, putative3e-22105
NC_010688:2781624:281060428106042811263660Xanthomonas campestris pv. campestris, complete genomehypothetical protein6e-22104