Pre_GI: BLASTP Hits

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Query: NC_004129:1741816:1761081 Pseudomonas fluorescens Pf-5, complete genome

Start: 1761081, End: 1761824, Length: 744

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1719407:173497217349721735703732Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein5e-104377
NC_007434:2810548:282921928292192829983765Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein5e-56217
NC_009076:2396747:241541824154182416182765Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-55215
NC_004193:950000:966346966346967155810Oceanobacillus iheyensis HTE831, complete genomehypothetical protein1e-52206
NC_016812:463000:463235463235464032798Sinorhizobium fredii HH103, complete genomethioredoxin-like superfamily3e-45181
NC_012997:2941627:295497029549702955626657Teredinibacter turnerae T7901, complete genomehypothetical protein7e-42170
NC_015434:5434500:544776354477635448476714Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein7e-40164
NC_013729:2258582:226400922640092264668660Kribbella flavida DSM 17836, complete genomeprotein of unknown function DUF899 thioredoxin family protein1e-32140
NC_017904:2641270:266393426639342664641708Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein6e-22104
NC_016113:994469:100614710061471006962816Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein2e-1995.9
NC_012522:3867167:389655538965553897010456Rhodococcus opacus B4, complete genomehypothetical protein3e-1168.9